RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 EBPLQ9BY08 206 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 IQCGQ9H095 443 aaKnown RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 OR10A5Q9H207 317 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 VIPAS39Q9H9C1 493 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ANKRA2Q9H9E1 313 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 LRTM1Q9HBL6 345 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 EML4Q9HC35 981 aaKnown RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ASIC5Q9NY37 505 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 GIMAP2Q9UG22 337 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 BAIAP2L1Q9UHR4 511 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 UTS2RQ9UKP6 389 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 PSME2Q9UL46 239 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 GPR55Q9Y2T6 319 aaPredicted RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 RAP2CQ9Y3L5 183 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 POLR3HQ9Y535 204 aaPredicted RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 CHCHD2Q9Y6H1 151 aaPredicted RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 FREM3P0C091 2139 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 PCNX3Q9H6A9 2034 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 NCKAP5O14513 1909 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 A0A087WV62 115 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 A0A0G2JMM0 328 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 A0A1W2PPB8 328 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 A0A1W2PRS3 328 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 KIR3DP1A8MWS1 328 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 B4DXG7 233 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 RGS14O43566 566 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SCN2BO60939 215 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SEMA7AO75326 666 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SEC22BO75396 215 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 NME6O75414 186 aaPredicted RBP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 TNFRSF21O75509 655 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SNUPNO95149 360 aaKnown RBP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 RASAL1O95294 804 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 STSP08842 583 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 MYZAPP0CAP1 466 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 NEFHP12036 1026 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 COX7A2P14406 83 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 DRD5P21918 477 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SLC1A6P48664 564 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SSR4P51571 173 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 OCRLQ01968 901 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 CHI3L2Q15782 390 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 NTRK2Q16620 822 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SMU1Q2TAY7 513 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 EIF2S3LQ2VIR3 472 aaKnown RBP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SPDYAQ5MJ70 313 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SH2D4BQ5SQS7 431 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 FNDC7Q5VTL7 733 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 TMEM81Q6P7N7 255 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 Q6ZPB1 254 aaPredicted RBP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 LARP4Q71RC2 724 aaKnown RBP eCLIP8.44□□□□□ -1.062e-12■■■■■ 31.7
HMGN1-201ENST00000288344 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 TICAM1Q8IUC6 712 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 GALNT12Q8IXK2 581 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 BCORP1Q8N888 145 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 ADCY4Q8NFM4 1077 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 OR7G2Q8NG99 324 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 PSMA8Q8TAA3 256 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 COQ8BQ96D53 544 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 ART5Q96L15 291 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 SGCZQ96LD1 299 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 AMDHD1Q96NU7 426 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 PSMG3-AS1Q96PY0 264 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 GLIPR2Q9H4G4 154 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 CLMPQ9H6B4 373 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 PNPOQ9NVS9 261 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF446Q9NWS9 450 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 ATP6V1HQ9UI12 483 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 FOXD3Q9UJU5 478 aaPredicted RBP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 CNOT11Q9UKZ1 510 aaKnown RBP8.44□□□□□ -1.06
HMGN1-201ENST00000288344 TMED5Q9Y3A6 229 aa8.44□□□□□ -1.06
HMGN1-201ENST00000288344 CENPEQ02224 2701 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 C2orf92A0A1B0GVN3 265 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 ATP6AP2A0A1C7CYW4 349 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 GNG14A0A1W2PPG7 69 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 GOLGA6L10A6NI86 522 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 UPK1AO00322 258 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 FCHO1O14526 889 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 KLF11O14901 512 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 PEX1O43933 1283 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 OR10H2O60403 315 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 ERAL1O75616 437 aaKnown RBP8.43□□□□□ -1.06
HMGN1-201ENST00000288344 ATP6AP2O75787 350 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 CCL3P10147 92 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 NAGAP17050 411 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 CNR1P21554 472 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 PTGDSP41222 190 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 PPICP45877 212 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 RPL14P50914 215 aaKnown RBP8.43□□□□□ -1.06
HMGN1-201ENST00000288344 PHC1P78364 1004 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 MRPS35P82673 323 aaKnown RBP8.43□□□□□ -1.06
HMGN1-201ENST00000288344 PSG6Q00889 435 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 EMX2Q04743 252 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 EXOSC7Q15024 291 aaKnown RBP8.43□□□□□ -1.06
HMGN1-201ENST00000288344 MLC1Q15049 377 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 SAMD5Q5TGI4 173 aa8.43□□□□□ -1.06
HMGN1-201ENST00000288344 AP1ARQ63HQ0 302 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms