RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SCO1O75880 301 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 SSTR2P30874 369 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 ANXA11P50995 505 aaKnown RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 KCNC3Q14003 757 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 INSL4Q14641 139 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 SLC36A4Q6YBV0 504 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 KLHL36Q8N4N3 616 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 OR52I1Q8NGK6 324 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 QRFPRQ96P65 431 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TNFRSF10DQ9UBN6 386 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TSC2P49815 1807 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 PCM1Q15154 2024 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3DA0A087WVF3 549 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3IA0A087WXS9 549 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3EA0A087X179 549 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3KA0A087X1G2 549 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3FA6NER0 549 aaPredicted RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 WASHC1A8K0Z3 465 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3LB9A6J9 549 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 FCER2P06734 321 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3HP0C7X1 549 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 ZNF311Q5JNZ3 666 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3GQ6DHY5 549 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3CQ6IPX1 549 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 ACSM5Q6NUN0 579 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 FAM20CQ8IXL6 584 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D3Q8IZP1 549 aaPredicted RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 SMPDL3AQ92484 453 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 KLK6Q92876 244 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 RC3H2Q9HBD1 1191 aaKnown RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 NUDT15Q9NV35 164 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 MRPL39Q9NYK5 338 aaKnown RBP12.68□□□□□ -0.38
SCAF4-201ENST00000286835 NPAP1Q9NZP6 1156 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 FBXL21Q9UKT6 434 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 MGAT4AQ9UM21 535 aa12.68□□□□□ -0.38
SCAF4-201ENST00000286835 GREB1Q4ZG55 1949 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 FGF19O95750 216 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 EPCAMP16422 314 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 BMP7P18075 431 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 CBLP22681 906 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 SOX18P35713 384 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 RAE1P78406 368 aaKnown RBP12.67□□□□□ -0.38
SCAF4-201ENST00000286835 RAB33AQ14088 237 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 MRPL58Q14197 206 aaKnown RBP12.67□□□□□ -0.38
SCAF4-201ENST00000286835 SLX4IPQ5VYV7 408 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 WASH2PQ6VEQ5 465 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 SLCO4C1Q6ZQN7 724 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 PIGXQ8TBF5 258 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 BTN2A2Q8WVV5 523 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 TM9SF4Q92544 642 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 CXXC1Q9P0U4 656 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-201ENST00000286835 GFYI3L273 518 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 RFXAPO00287 272 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 UGDHO60701 494 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 MMP20O60882 483 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 TSPAN9O75954 239 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 OR5F1O95221 314 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 MAT2AP31153 395 aaKnown RBP12.67□□□□□ -0.38
SCAF4-201ENST00000286835 VIPR2P41587 438 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 RPS5P46782 204 aaKnown RBP12.67□□□□□ -0.38
SCAF4-201ENST00000286835 ZNF79Q15937 498 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 SLC25A46Q96AG3 418 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 TBC1D20Q96BZ9 403 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 C12orf66Q96MD2 445 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 IL1AP01583 271 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 DRD5P21918 477 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 OR3A3P47888 321 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■■□□ 15.4
SCAF4-201ENST00000286835 POU4F3Q15319 338 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 RALGAPA2Q2PPJ7 1873 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 VN1R5Q7Z5H4 357 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 ZNF433Q8N7K0 673 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-201ENST00000286835 RFKQ969G6 155 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 TREX2Q9BQ50 279 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-201ENST00000286835 SAGE1Q9NXZ1 904 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 PLXNB2O15031 1838 aa12.67□□□□□ -0.38
SCAF4-201ENST00000286835 DAPL1A0PJW8 107 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 C1orf226A1L170 272 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 PCP4L1A6NKN8 68 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 CHST10O43529 356 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 SRPRAP08240 638 aaKnown RBP12.66□□□□□ -0.38
SCAF4-201ENST00000286835 SAGP10523 405 aaPredicted RBP12.66□□□□□ -0.38
SCAF4-201ENST00000286835 HOXC8P31273 242 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 ACVR1BP36896 505 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 GALK2Q01415 458 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 TCTN3Q6NUS6 607 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 CHMP1BQ7LBR1 199 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 NANOGP1Q8N7R0 232 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 CREB3L4Q8TEY5 395 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 MKRN2Q9H000 416 aaKnown RBP12.66□□□□□ -0.38
SCAF4-201ENST00000286835 RETREG1Q9H6L5 497 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 TMPRSS11EQ9UL52 423 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 SH2B3Q9UQQ2 575 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 BRCA1P38398 1863 aaKnown RBP12.66□□□□□ -0.38
SCAF4-201ENST00000286835 PRKRAO75569 313 aaKnown RBP12.66□□□□□ -0.38
SCAF4-201ENST00000286835 GCM2O75603 506 aaPredicted RBP12.66□□□□□ -0.38
SCAF4-201ENST00000286835 ACVR2AP27037 513 aa12.66□□□□□ -0.38
SCAF4-201ENST00000286835 GDI1P31150 447 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms