RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 C2orf42Q9NWW7 574 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 COL3A1P02461 1466 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 LOC100509620A0A075B734 347 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 OLFM2O95897 454 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 TP53P04637 393 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 C6P13671 934 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GABRA3P34903 492 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 PBX1P40424 430 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 PPP5CP53041 499 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SSTP61278 116 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SRPXP78539 464 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 ADARB1P78563 741 aaKnown RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF460Q14592 562 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GALNT10Q86SR1 603 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 ACBD7Q8N6N7 88 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GALNT6Q8NCL4 622 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 RHBDD1Q8TEB9 315 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 ZDHHC1Q8WTX9 485 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 PYURFQ96I23 114 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 VRTNQ9H8Y1 702 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 FAIMQ9NVQ4 179 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 MGAT4CQ9UBM8 478 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 KCND3Q9UK17 655 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 MED1Q15648 1581 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 DOPEY1Q5JWR5 2465 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF840PA6NDX5 716 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 C9IYK1 514 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 C9JVG2 144 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SULT2B1O00204 365 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 KIAA0355O15063 1070 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 CLCN2P51788 898 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 AQP4P55087 323 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GABARAPL2P60520 117 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SLC3A1Q07837 685 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 RUNX3Q13761 415 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GINS1Q14691 196 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 FBXO48Q5FWF7 155 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 EXOSC6Q5RKV6 272 aaKnown RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF280BQ86YH2 543 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 OR14A16Q8NHC5 309 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SFXN5Q8TD22 340 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 OR14A2Q96R54 314 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 RANBP9Q96S59 729 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 RPF2Q9H7B2 306 aaKnown RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SLC7A8Q9UHI5 535 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SLC35A3Q9Y2D2 325 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF860A6NHJ4 632 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SOBPA7XYQ1 873 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GRXCR1A8MXD5 290 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 BHMG1C9JSJ3 638 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SCAMP1O15126 338 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GTF2F2P13984 249 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 TAS2R38P59533 333 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 RAB5BP61020 215 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 DEFA5Q01523 94 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GPR176Q14439 515 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SPANXN4Q5MJ08 99 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 MARVELD2Q8N4S9 558 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 OR5H2Q8NGV7 314 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 PHOSPHO2Q8TCD6 241 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 GLYATL2Q8WU03 294 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 NDRG1Q92597 394 aaKnown RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 SMOQ99835 787 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 TMED9Q9BVK6 235 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 EPHX3Q9H6B9 360 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 STUB1Q9UNE7 303 aa3.88□□□□□ -1.79
SCN3A-201ENST00000283254 ARHGEF28Q8N1W1 1705 aaKnown RBP3.88□□□□□ -1.79
SCN3A-201ENST00000283254 TTC24A2A3L6 582 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 RCCD1A6NED2 376 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 A8MVM7 634 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 C11orf98E9PRG8 122 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 F5H0A9 414 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TOR1AO14656 332 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 PPP1R11O60927 126 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 JRKO75564 520 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CNTN5O94779 1100 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 EIF4EP06730 217 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SFTPBP07988 381 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 G6PDP11413 515 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CSF2RAP15509 400 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 PTGS2P35354 604 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 PRKXP51817 358 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 GPX6P59796 221 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 RHDQ02161 417 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SLC14A2Q15849 920 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CCL14Q16627 93 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CDNFQ49AH0 187 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SPATC1Q76KD6 591 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 FITM2Q8N6M3 262 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 NETO2Q8NC67 525 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 IMP4Q96G21 291 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SECISBP2Q96T21 854 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 RANBP3Q9H6Z4 567 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ACSS2Q9NR19 701 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 RLIMQ9NVW2 624 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SLC39A1Q9NY26 324 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SPEF2Q9C093 1822 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 OR6C6A6NF89 314 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 OTOL1A6NHN0 477 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 A6NHS1 94 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms