RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 GPC6Q9Y625 555 aaPredicted RBP13.59□□□□□ -0.23
TRIM23-202ENST00000274327 FER1L5A0AVI2 2057 aa13.59□□□□□ -0.23
TRIM23-202ENST00000274327 COL5A1P20908 1838 aaPredicted RBP13.58□□□□□ -0.23
TRIM23-202ENST00000274327 PRAMEF25A6NGN4 478 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 hCG_2039718K7EN88 272 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 NTN3O00634 580 aaPredicted RBP13.58□□□□□ -0.24
TRIM23-202ENST00000274327 DLGAP1O14490 977 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 CLDN4O14493 209 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 GNGT2O14610 69 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 EI24O14681 340 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 BMP10O95393 424 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 CHRM4P08173 479 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 SMIM18P0DKX4 95 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 XCR1P46094 333 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 CRISP3P54108 245 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 BTG2P78543 158 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 MAP4K2Q12851 820 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 SLC13A2Q13183 592 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 GNA13Q14344 377 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 OR2T5Q6IEZ7 315 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 HEPHL1Q6MZM0 1159 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 B3GNT6Q6ZMB0 384 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 OR2T29Q8NH02 315 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 OR5K1Q8NHB7 308 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 CCDC74BQ96LY2 380 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF607Q96SK3 696 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 NDC1Q9BTX1 674 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 RSPO3Q9BXY4 272 aaPredicted RBP13.58□□□□□ -0.24
TRIM23-202ENST00000274327 THSD1Q9NS62 852 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 GIN1Q9NXP7 522 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 VNN3Q9NY84 501 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 DHCR7Q9UBM7 475 aaKnown RBP13.58□□□□□ -0.24
TRIM23-202ENST00000274327 AP4B1Q9Y6B7 739 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 MAU2Q9Y6X3 613 aa13.58□□□□□ -0.24
TRIM23-202ENST00000274327 A0A0G2JPF8 293 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 DUXAA6NLW8 204 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 HNRNPCL2B2RXH8 293 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 HNRNPCL3B7ZW38 293 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 RECKO95980 971 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 AGR2O95994 175 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 HNRNPCL4P0DMR1 293 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 ACP2P11117 423 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 DCTP40126 519 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 OR1D4P47884 311 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 IST1P53990 364 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 DSG2Q14126 1118 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 DUSP7Q16829 419 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 ZCCHC12Q6PEW1 402 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 TMEM179BQ7Z7N9 219 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 SLITRK4Q8IW52 837 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 SMYD1Q8NB12 490 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 GPR32P1Q8NGA4 272 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 SPPL2AQ8TCT8 520 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 ADAMTS15Q8TE58 950 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 DOK4Q8TEW6 326 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 APOBEC4Q8WW27 367 aaKnown RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 GEMIN6Q8WXD5 167 aaKnown RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 OR1F2PQ96R84 312 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 BTBD2Q9BX70 525 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 OSBPL11Q9BXB4 747 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 ALOXE3Q9BYJ1 711 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 CXorf21Q9HAI6 301 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 SIDT1Q9NXL6 827 aaKnown RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 NDOR1Q9UHB4 597 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 LIPT1Q9Y234 373 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 R4GN57 208 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 OR10H2O60403 315 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 NME6O75414 186 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 CDC123O75794 336 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 CBX7O95931 251 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 ETS2P15036 469 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 S1PR1P21453 382 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 ALAS2P22557 587 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 GALNSP34059 522 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 MAP3K8P41279 467 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 GRK6P43250 576 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 STT3AP46977 705 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 KCNJ5P48544 419 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 NUBP1P53384 320 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 NR1H2P55055 460 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 STX4Q12846 297 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 DUSP8Q13202 625 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 BIKQ13323 160 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 APOFQ13790 326 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 DAG1Q14118 895 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 NHSL2Q5HYW2 709 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 SLC16A11Q8NCK7 471 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 RCBTB1Q8NDN9 531 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 RASSF5Q8WWW0 418 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 HOXB13Q92826 284 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 TRNT1Q96Q11 434 aaKnown RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 SYNDIG1Q9H7V2 258 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 C11orf16Q9NQ32 467 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 NDUFAF4Q9P032 175 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 BAG5Q9UL15 447 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 MMACHCQ9Y4U1 282 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-202ENST00000274327 DSPPQ9NZW4 1301 aa13.57□□□□□ -0.24
TRIM23-202ENST00000274327 RALGAPA1Q6GYQ0 2036 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms