RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 APOC1P02654 83 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 TCRBP04435 133 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 FGF2P09038 288 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 HIST1H2AGP0C0S8 130 aaPredicted RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 JUPP14923 745 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 ELK1P19419 428 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 HIST1H2ADP20671 130 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 FGF9P31371 208 aaPredicted RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 SPAM1P38567 509 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 MMP12P39900 470 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 NSG1P42857 185 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 RECQLP46063 649 aaPredicted RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 ASMTP46597 345 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 HAAOP46952 286 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 LIMS1P48059 325 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 SLC6A12P48065 614 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 WNT4P56705 351 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 TCTN1Q2MV58 587 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 MPP7Q5T2T1 576 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 RAET1GQ6H3X3 334 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 KRT74Q7RTS7 529 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 CAMKMTQ7Z624 323 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 ZNF280BQ86YH2 543 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 CRIPAKQ8N1N5 446 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 BVESQ8NE79 360 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 EID2BQ96D98 161 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 APIPQ96GX9 242 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 HIST1H2AHQ96KK5 128 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 HIST1H2AJQ99878 128 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 SLC12A9Q9BXP2 914 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 ELAC1Q9H777 363 aaKnown RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 ENAMQ9NRM1 1142 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 RUVBL1Q9Y265 456 aaKnown RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 SCN5AQ14524 2016 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 SLC38A8A6NNN8 435 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 PRRG1O14668 218 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 GPR39O43194 453 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 FGF18O76093 207 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 RGS11O94810 467 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 CD160O95971 181 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 SOD1P00441 154 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 NMBP08949 121 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 MPC1LP0DKB6 136 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 NR2F6P10588 404 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 HSD3B1P14060 373 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 AHCYP23526 432 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 HSD3B2P26439 372 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 TSPAN5P62079 268 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 RPS7P62081 194 aaKnown RBP12.41□□□□□ -0.42
NUP54-201ENST00000264883 TPBGQ13641 420 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 HEPACAMQ14CZ8 416 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 RGNQ15493 299 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 MPEG1Q2M385 716 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 LIPJQ5W064 366 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 CEACAM20Q6UY09 585 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 SLC39A5Q6ZMH5 540 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 WDR53Q7Z5U6 358 aaPredicted RBP12.41□□□□□ -0.42
NUP54-201ENST00000264883 NXPE1Q8N323 547 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 TCEANCQ8N8B7 351 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 IL17RCQ8NAC3 791 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 MOSPD2Q8NHP6 518 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 DPH7Q9BTV6 452 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 EBPLQ9BY08 206 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 DNAJC11Q9NVH1 559 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 FBXL2Q9UKC9 423 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 DSPPQ9NZW4 1301 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 PLXNA4Q9HCM2 1894 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 ARRDC5A6NEK1 342 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 APOL3O95236 402 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 SOX14O95416 240 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 CBX7O95931 251 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 APOC3P02656 99 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 TFPIP10646 304 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 GABRA5P31644 462 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 XCR1P46094 333 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 HMGA2P52926 109 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 BLVRAP53004 296 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 LTB4RQ15722 352 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 ADGRF1Q5T601 910 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 OR2G6Q5TZ20 316 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 C1orf53Q5VUE5 145 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 FAM198BQ6UWH4 519 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 UNC5DQ6UXZ4 953 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 NLRC3Q7RTR2 1065 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 NAGSQ8N159 534 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 BEST4Q8NFU0 473 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 COQ8AQ8NI60 647 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 GATAD2BQ8WXI9 593 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 HSD17B8Q92506 261 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 TOX2Q96NM4 488 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 IL26Q9NPH9 171 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 ACTR10Q9NZ32 417 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 RHCGQ9UBD6 479 aa12.41□□□□□ -0.42
NUP54-201ENST00000264883 ZNF282Q9UDV7 671 aaPredicted RBP12.41□□□□□ -0.42
NUP54-201ENST00000264883 AGAP14A8MT82 685 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 HEPACAM2A8MVW5 462 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 FAM227AF5H4B4 570 aa12.4□□□□□ -0.42
NUP54-201ENST00000264883 G3V3Q6 166 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms