RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MYF6P23409 242 aa17.14■□□□□ 0.33
COL5A3-201ENST00000264828 AQP2P41181 271 aa17.14■□□□□ 0.33
COL5A3-201ENST00000264828 NFATC3Q12968 1075 aa17.14■□□□□ 0.33
COL5A3-201ENST00000264828 UGT3A2Q3SY77 523 aa17.14■□□□□ 0.33
COL5A3-201ENST00000264828 HOXB13Q92826 284 aaPredicted RBP17.14■□□□□ 0.33
COL5A3-201ENST00000264828 CCDC32Q9BV29 185 aa17.14■□□□□ 0.33
COL5A3-201ENST00000264828 DNAJB5O75953 348 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 OXSR1O95747 527 aaPredicted RBP17.13■□□□□ 0.33
COL5A3-201ENST00000264828 GGT2P36268 569 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 C1orf61Q13536 156 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 HYAL4Q2M3T9 481 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 ARHGAP11AQ6P4F7 1023 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 OR8K5Q8NH50 307 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 IRF7Q92985 503 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 INPP5KQ9BT40 448 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 CACNG6Q9BXT2 260 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 PCDHGA2Q9Y5H1 932 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 BACE2Q9Y5Z0 518 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 C1orf226A1L170 272 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 MAFKO60675 156 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 SPDEFO95238 335 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 FANCFQ9NPI8 374 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 FAM171A2A8MVW0 826 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 CDKN2CP42773 168 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 DENND1AQ8TEH3 1009 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 A0A1W2PQL4 384 aaPredicted RBP17.13■□□□□ 0.33
COL5A3-201ENST00000264828 GXYLT2A0PJZ3 443 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 FAM221BA6H8Z2 402 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 C7P10643 843 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 CNR2P34972 360 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 HNRNPKP61978 463 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL5A3-201ENST00000264828 SLC35G1Q2M3R5 365 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 NXPE4Q6UWF7 544 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 ACBD7Q8N6N7 88 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 CHDHQ8NE62 594 aaPredicted RBP17.13■□□□□ 0.33
COL5A3-201ENST00000264828 OR13J1Q8NGT2 312 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 PHB2Q99623 299 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 LSAMPQ13449 338 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 NKPD1Q17RQ9 610 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 FAM198BQ6UWH4 519 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 STK35Q8TDR2 534 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 TMIGD2Q96BF3 282 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 FBRSQ9HAH7 460 aa17.13■□□□□ 0.33
COL5A3-201ENST00000264828 PRKYO43930 277 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 OR8U9P0C7N5 309 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 FDXRP22570 491 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 SH3BP2P78314 561 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 INAVAQ3KP66 663 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 DRAXINQ8NBI3 349 aaPredicted RBP17.12■□□□□ 0.33
COL5A3-201ENST00000264828 ARMC1Q9NVT9 282 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 MKS1Q9NXB0 559 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 GPRC5BQ9NZH0 403 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 DIRAS3O95661 229 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 PPP1R3DO95685 299 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 MTNR1AP48039 350 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 MRPL49Q13405 166 aaKnown RBP17.12■□□□□ 0.33
COL5A3-201ENST00000264828 TAS1R3Q7RTX0 852 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 SLC5A8Q8N695 610 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF461Q8TAF7 563 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 TMEM19Q96HH6 336 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 DPH7Q9BTV6 452 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 HINT2Q9BX68 163 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 PCDHGA6Q9Y5G7 932 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 RAD1O60671 282 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 F2P00734 622 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 AGTR1P30556 359 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 UPP1Q16831 310 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 FAM69BQ5VUD6 431 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 ZC3H14Q6PJT7 736 aaKnown RBP17.12■□□□□ 0.33
COL5A3-201ENST00000264828 OR9Q2Q8NGE9 314 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 FOLH1BQ9HBA9 442 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF225Q9UK10 706 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 EPOP01588 193 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 PABPC4LP0CB38 370 aaKnown RBP17.12■□□□□ 0.33
COL5A3-201ENST00000264828 PROZP22891 400 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 RSU1Q15404 277 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 RAB6CQ53S08 254 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF778Q96MU6 729 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 RAB6CQ9H0N0 254 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 KLHL9Q9P2J3 617 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 LSM5Q9Y4Y9 91 aaKnown RBP17.12■□□□□ 0.33
COL5A3-201ENST00000264828 RNF215Q9Y6U7 377 aa17.12■□□□□ 0.33
COL5A3-201ENST00000264828 hCG_1807616A0A1W2PRN6 198 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF542PQ5EBM4 170 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 TSPAN33Q86UF1 283 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 TMEM173Q86WV6 379 aaPredicted RBP17.11■□□□□ 0.33
COL5A3-201ENST00000264828 TRIB3Q96RU7 358 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 CPNE6O95741 557 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 EVI2BP34910 448 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 SELENOVP59797 346 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 TMPPEQ6ZT21 453 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 PXKQ7Z7A4 578 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 WDTC1Q8N5D0 677 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 OR51L1Q8NGJ5 315 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 ASB15Q8WXK1 588 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 PBDC1Q9BVG4 233 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 SLC2A4RGQ9NR83 387 aa17.11■□□□□ 0.33
COL5A3-201ENST00000264828 C5AR2Q9P296 337 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms