RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SNRPB2P08579 225 aaKnown RBP14.74□□□□□ -0.05
USE1-201ENST00000263897 COX6B1P14854 86 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 PCSK2P16519 638 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 ACVR2AP27037 513 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 RPP38P78345 283 aaKnown RBP14.74□□□□□ -0.05
USE1-201ENST00000263897 MRPS35P82673 323 aaKnown RBP14.74□□□□□ -0.05
USE1-201ENST00000263897 ZNF628Q5EBL2 1059 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 BICRALQ6AI39 1079 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 ZNF585AQ6P3V2 769 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 ACAD11Q709F0 780 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 NUP54Q7Z3B4 507 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 PACS2Q86VP3 889 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 OR52R1Q8NGF1 315 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 OR2W6PQ8NHA6 318 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 LILRB4Q8NHJ6 448 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.74□□□□□ -0.05
USE1-201ENST00000263897 ERP27Q96DN0 273 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 ZNF597Q96LX8 424 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 RILPQ96NA2 401 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 EBPLQ9BY08 206 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 TNFRSF12AQ9NP84 129 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 PFDN4Q9NQP4 134 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 B4GALT7Q9UBV7 327 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 PRODH2Q9UF12 536 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 RNF6Q9Y252 685 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 PLLPQ9Y342 182 aa14.74□□□□□ -0.05
USE1-201ENST00000263897 INTS1Q8N201 2190 aaKnown RBP14.73□□□□□ -0.05
USE1-201ENST00000263897 FIGNL2A6NMB9 653 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 CRCPO75575 148 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 NUDT17P0C025 328 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 UROSP10746 265 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 ENDOUP21128 410 aaKnown RBP14.73□□□□□ -0.05
USE1-201ENST00000263897 CHRNB4P30926 498 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 MPIP34949 423 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 PTGER4P35408 488 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 NUP107P57740 925 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 VSNL1P62760 191 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 C2orf80Q0P641 193 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 CEBPEQ15744 281 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 NNATQ16517 81 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 IMPG1Q17R60 797 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 WLSQ5T9L3 541 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 FNDC7Q5VTL7 733 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 LIPMQ5VYY2 423 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 RTL6Q6ICC9 239 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 C10orf107Q8IVU9 208 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 NEIL3Q8TAT5 605 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 FAM76AQ8TAV0 307 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 KAT2AQ92830 837 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 TTYH2Q9BSA4 534 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 SHCBP1LQ9BZQ2 653 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 RRAGDQ9NQL2 400 aaPredicted RBP14.73□□□□□ -0.05
USE1-201ENST00000263897 GIMAP4Q9NUV9 329 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 TAS2R7Q9NYW3 318 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 SPRR3Q9UBC9 169 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 MID2Q9UJV3 735 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 GPR55Q9Y2T6 319 aaPredicted RBP14.73□□□□□ -0.05
USE1-201ENST00000263897 WBP11Q9Y2W2 641 aaKnown RBP14.73□□□□□ -0.05
USE1-201ENST00000263897 CCL27Q9Y4X3 112 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 FAM215AQ9Y5M1 114 aa14.73□□□□□ -0.05
USE1-201ENST00000263897 TO15178 435 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 TRIM13O60858 407 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 WDR1O75083 606 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 RSL1D1O76021 490 aaKnown RBP14.72□□□□□ -0.05
USE1-201ENST00000263897 HOXD4P09016 255 aaPredicted RBP14.72□□□□□ -0.05
USE1-201ENST00000263897 DDCP20711 480 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 GDF1P27539 372 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 TRPC1P48995 793 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 ZNF763Q0D2J5 394 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 PRSS53Q2L4Q9 553 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 DESI1Q6ICB0 168 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 FAM71E1Q6IPT2 247 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 TMEM81Q6P7N7 255 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 B3GNT6Q6ZMB0 384 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 TRABD2AQ86V40 505 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 CCDC71Q8IV32 467 aaPredicted RBP14.72□□□□□ -0.05
USE1-201ENST00000263897 SRRM1Q8IYB3 904 aaKnown RBP14.72□□□□□ -0.05
USE1-201ENST00000263897 RIBC1Q8N443 379 aaPredicted RBP14.72□□□□□ -0.05
USE1-201ENST00000263897 BANPQ8N9N5 519 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 OR9A2Q8NGT5 310 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 HGDQ93099 445 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 OMA1Q96E52 524 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 METTL2AQ96IZ6 378 aaKnown RBP14.72□□□□□ -0.05
USE1-201ENST00000263897 GNRHR2Q96P88 292 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 BBS4Q96RK4 519 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 SPOCK3Q9BQ16 436 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 GATA5Q9BWX5 397 aaPredicted RBP14.72□□□□□ -0.05
USE1-201ENST00000263897 ENKD1Q9H0I2 346 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 SLC6A15Q9H2J7 730 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 UBQLN3Q9H347 655 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 ANKRA2Q9H9E1 313 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 PCDHGB3Q9Y5G1 929 aa14.72□□□□□ -0.05
USE1-201ENST00000263897 FRG2CA6NGY1 282 aa14.71□□□□□ -0.05
USE1-201ENST00000263897 MYO1GB0I1T2 1018 aa14.71□□□□□ -0.05
USE1-201ENST00000263897 PLOD3O60568 738 aa14.71□□□□□ -0.05
USE1-201ENST00000263897 SEC22BO75396 215 aa14.71□□□□□ -0.05
USE1-201ENST00000263897 TRAPPC6AO75865 159 aa14.71□□□□□ -0.05
USE1-201ENST00000263897 GLI4P10075 376 aa14.71□□□□□ -0.05
USE1-201ENST00000263897 MASP1P48740 699 aa14.71□□□□□ -0.05
USE1-201ENST00000263897 PCLAFQ15004 111 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms