RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 KCNIP3Q9Y2W7 256 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 PCDHGA8Q9Y5G5 932 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 NALCNQ8IZF0 1738 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 BORCS7-ASMTA0A0B4J1R7 106 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 A0A0G2JMP0 313 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 GXYLT2A0PJZ3 443 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 PIRO00625 290 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 GJB3O75712 270 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 DCKP27707 260 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 C21orf33P30042 268 aaPredicted RBP11.49□□□□□ -0.57
SMG6-201ENST00000263073 PSMB10P40306 273 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 ZNF41P51814 821 aaPredicted RBP11.49□□□□□ -0.57
SMG6-201ENST00000263073 ART1P52961 327 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 LMAN2Q12907 356 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 ZNF674Q2M3X9 581 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 TMEM225Q6GV28 225 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 GTPBP8Q8N3Z3 284 aaPredicted RBP11.49□□□□□ -0.57
SMG6-201ENST00000263073 CELF5Q8N6W0 485 aaKnown RBP11.49□□□□□ -0.57
SMG6-201ENST00000263073 OR4M2Q8NGB6 313 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 DCUN1D4Q92564 292 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 C3orf30Q96M34 536 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 SLA2Q9H6Q3 261 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 EMX1Q04741 257 aaPredicted RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 MGAT3Q09327 533 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 CATSPEREQ5SY80 951 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 NRROSQ86YC3 692 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 OR5D16Q8NGK9 328 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 MACROD1Q9BQ69 325 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 C20orf27Q9GZN8 174 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 RNF32Q9H0A6 362 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 SLAMF8Q9P0V8 285 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 CNOT11Q9UKZ1 510 aaKnown RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 LTN1O94822 1766 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 NPIPA5A0A0B4J1W7 369 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 OTOL1A6NHN0 477 aaPredicted RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 MEIS3P2A8K0S8 358 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 NPIPA7E9PJI5 369 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ARPC1BO15143 372 aaKnown RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 CYP17A1P05093 508 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 NPIPA8P0DM63 369 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ADRB3P13945 408 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 HSD17B1P14061 328 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 JUPP14923 745 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 NDUFV2P19404 249 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 BTN1A1Q13410 526 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 GK2Q14410 553 aaPredicted RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 STEAP4Q687X5 459 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 RNF111Q6ZNA4 994 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 B3GNT8Q7Z7M8 397 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 TSPYL5Q86VY4 417 aaPredicted RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 SYT14Q8NB59 555 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ACVR1CQ8NER5 493 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 OR4D6Q8NGJ1 314 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 FOLH1BQ9HBA9 442 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 J3KTA2 159 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 PLSCR1O15162 318 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 GPR39O43194 453 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 UCHL1P09936 223 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 PROZP22891 400 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 PBX2P40425 430 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 SNTA1Q13424 505 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 SPRYD7Q5W111 196 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 P4HA3Q7Z4N8 544 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 PARP16Q8N5Y8 322 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 TMEM156Q8N614 296 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 NATD1Q8N6N6 113 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 SPRYD4Q8WW59 207 aaPredicted RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 GTF2H4Q92759 462 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 RPL3LQ92901 407 aaKnown RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 TESCQ96BS2 214 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 CNN2Q99439 309 aaKnown RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 FAM83CQ9BQN1 747 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 PCDHGB2Q9Y5G2 931 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 MEIOCA2RUB1 952 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 POU3F4P49335 361 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 RAB4BP61018 213 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 RBM39Q14498 530 aaKnown RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 APCDD1Q8J025 514 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 KDM1BQ8NB78 822 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ZMYND19Q96E35 227 aaPredicted RBP11.48□□□□□ -0.57
SMG6-201ENST00000263073 SMIM3Q9BZL3 60 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 MAGIXQ9H6Y5 334 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 NDUFAF4Q9P032 175 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 A0A0U1RQF3 1178 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ZCWPW2A0A1B0GU75 182 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 GYPBP06028 91 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 CD3GP09693 182 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 PET100P0DJ07 73 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 ZNF30P17039 623 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 SHMT2P34897 504 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 KCNC1P48547 511 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 FXYD4P59646 89 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 KCNJ8Q15842 424 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 MICAQ29983 383 aa11.48□□□□□ -0.57
SMG6-201ENST00000263073 PLEKHS1Q5SXH7 462 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms