RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ZNF655Q8N720 491 aaPredicted RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 GOLM1Q8NBJ4 401 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 HIPK4Q8NE63 616 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 CDC26Q8NHZ8 85 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 PYDC1Q8WXC3 89 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 POP5Q969H6 163 aaKnown RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 RGMAQ96B86 450 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 MTERF3Q96E29 417 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 DUS3LQ96G46 650 aaKnown RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 MAGED4Q96JG8 741 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 PRPF18Q99633 342 aaKnown RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 SH3GL1Q99961 368 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 TREX2Q9BQ50 279 aaPredicted RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 CENPKQ9BS16 269 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 DUSP26Q9BV47 211 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.41□□□□□ -0.42
SGCA-201ENST00000262018 ALG2Q9H553 416 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 TNFRSF10DQ9UBN6 386 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 BTNL2Q9UIR0 455 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 RPH3AQ9Y2J0 694 aaPredicted RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 PRSS51A0A1B0GVH4 220 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 OR2A25A4D2G3 310 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 LRIT2A6NDA9 550 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 H3BNX3 289 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 WISP2O76076 250 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 F10P00742 488 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 LAMP1P11279 417 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 RPS15AP62244 130 aaKnown RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 PLIN5Q00G26 463 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 C2orf80Q0P641 193 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 LRRC74AQ0VAA2 488 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 SELPLGQ14242 412 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 ZC3H12BQ5HYM0 836 aaKnown RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 ANXA8L1Q5VT79 327 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 LCN8Q6JVE9 175 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 UBE3DQ7Z6J8 389 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 DHFR2Q86XF0 187 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 TMEM132CQ8N3T6 1108 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 TRPV3Q8NET8 790 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 CCDC115Q96NT0 180 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 KCTD14Q9BQ13 255 aaPredicted RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 CPPED1Q9BRF8 314 aaPredicted RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 INPP5KQ9BT40 448 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 SORBS1Q9BX66 1292 aaKnown RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 TRIM15Q9C019 465 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 BHLHE41Q9C0J9 482 aaPredicted RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 AICDAQ9GZX7 198 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 DDX31Q9H8H2 851 aaKnown RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 FAM60AQ9NP50 221 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 DLL4Q9NR61 685 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 SLC22A11Q9NSA0 550 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 CCM2LQ9NUG4 571 aaPredicted RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 IRAK4Q9NWZ3 460 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 C6orf203Q9P0P8 240 aaPredicted RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 ACTR3BQ9P1U1 418 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.4□□□□□ -0.42
SGCA-201ENST00000262018 KLHL20Q9Y2M5 609 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 MEMO1Q9Y316 297 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 PCDHB14Q9Y5E9 798 aa12.4□□□□□ -0.42
SGCA-201ENST00000262018 AQP12BA6NM10 295 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 RFXANKO14593 260 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 ZSCAN9O15535 394 aaPredicted RBP12.39□□□□□ -0.43
SGCA-201ENST00000262018 HCRTR1O43613 425 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 TBX19O60806 448 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 B3GALT4O96024 378 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 GBAP04062 536 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 CTSBP07858 339 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 FOSL1P15407 271 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 ATP6V1B2P21281 511 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 CDKN2CP42773 168 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 CLCN2P51788 898 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 GTF2A1P52655 376 aaPredicted RBP12.39□□□□□ -0.43
SGCA-201ENST00000262018 MTPNP58546 118 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 TAS2R50P59544 299 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 TRA2BP62995 288 aaKnown RBP12.39□□□□□ -0.43
SGCA-201ENST00000262018 MRPS22P82650 360 aaKnown RBP12.39□□□□□ -0.43
SGCA-201ENST00000262018 RELAQ04206 551 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 HYAL2Q12891 473 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 MUM1Q2TAK8 710 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 GTDC1Q4AE62 458 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 ZNF385BQ569K4 471 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 CCNYL2Q5T2Q4 361 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 RNF111Q6ZNA4 994 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 LRRC74BQ6ZQY2 392 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 SHISA6Q6ZSJ9 500 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 NUDT13Q86X67 352 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 AQP12AQ8IXF9 295 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 DNAJC22Q8N4W6 341 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 CA5BP1Q8WTZ4 195 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 MIEF2Q96C03 454 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 SLC6A13Q9NSD5 602 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 ATAD3AQ9NVI7 634 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 PTGFRNQ9P2B2 879 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 PLCL2Q9UPR0 1127 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 SNX13Q9Y5W8 968 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 CSPG4Q6UVK1 2322 aa12.39□□□□□ -0.43
SGCA-201ENST00000262018 ZNF469Q96JG9 3925 aaPredicted RBP12.39□□□□□ -0.43
SGCA-201ENST00000262018 KIAA1324LA8MWY0 1029 aaPredicted RBP12.38□□□□□ -0.43
SGCA-201ENST00000262018 H3BMH7 237 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms