RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 SSNA1O43805 119 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 OXSR1O95747 527 aaPredicted RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 IGFBP6P24592 240 aaPredicted RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 PSMB5P28074 263 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 NKX3-2P78367 333 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 IL18Q14116 193 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 OGFOD2Q6N063 350 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 FTMTQ8N4E7 242 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 OR6N2Q8NGY6 317 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 DNAJA4Q8WW22 397 aaPredicted RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 PALMDQ9NP74 551 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 PTBP2Q9UKA9 531 aaKnown RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 CNTRLQ7Z7A1 2325 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 RLN1P04808 185 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 ZNF43P17038 809 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 GMPRP36959 345 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 RAB38P57729 211 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 SWT1Q5T5J6 900 aaKnown RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 Q6ZNB5 142 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 OR2L3Q8NG85 312 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 FAM129BQ96TA1 746 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 CUEDC1Q9NWM3 386 aaPredicted RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 EIF3KQ9UBQ5 218 aaKnown RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 CLEC4EQ9ULY5 219 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 SLC35A3Q9Y2D2 325 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 A0A1W2PRQ8 180 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 SHISA7A6NL88 538 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 FMO6PO60774 539 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 H6PDO95479 791 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 PNMTP11086 282 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 UBL4AP11441 157 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 GADD45AP24522 165 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 ECHS1P30084 290 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 TAP2Q03519 686 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 SRYQ05066 204 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 ARFRP1Q13795 201 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 HENMT1Q5T8I9 393 aaKnown RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 SLC15A3Q8IY34 581 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDH1-201ENST00000261769 NSMAFQ92636 917 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 TM9SF2Q99805 663 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 EVA1AQ9H8M9 152 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 SDR39U1Q9NRG7 319 aaPredicted RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 SMOXQ9NWM0 555 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 TRBV11-1A0A0K0K1C0 115 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 PSMD9O00233 223 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 SNNO75324 88 aaPredicted RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 S1PR1P21453 382 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 ZNF101Q8IZC7 436 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 OR51Q1Q8NH59 317 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 SETD6Q8TBK2 473 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 NKD1Q969G9 470 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 LYSMD1Q96S90 227 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 ELF4Q99607 663 aaPredicted RBP13.18□□□□□ -0.3
CDH1-201ENST00000261769 BAIAP2Q9UQB8 552 aa13.18□□□□□ -0.3
CDH1-201ENST00000261769 LOC100130705A0A1B0GUX0 176 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 H0YC42 278 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 J3QLW9 94 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 TFECO14948 347 aaPredicted RBP13.17□□□□□ -0.3
CDH1-201ENST00000261769 SPARCP09486 303 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 ZNF19P17023 458 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 SLC5A2P31639 672 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 OR3A3P47888 321 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 OR3A2P47893 321 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 TMEM196Q5HYL7 178 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 TCEANCQ8N8B7 351 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 SLC37A2Q8TED4 501 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 MOCOSQ96EN8 888 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 PDXPQ96GD0 296 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 CDX2Q99626 313 aaPredicted RBP13.17□□□□□ -0.3
CDH1-201ENST00000261769 INTS6Q9UL03 887 aaKnown RBP13.17□□□□□ -0.3
CDH1-201ENST00000261769 A0A075B6Q4 140 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 CXorf51AA0A1B0GTR3 108 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 PDLIM1O00151 329 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 DHFRP00374 187 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 MMP2P08253 660 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 SDC1P18827 310 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 CAPZA1P52907 286 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 ARHGAP11AQ6P4F7 1023 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 IL17RCQ8NAC3 791 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 GOLM1Q8NBJ4 401 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 STON2Q8WXE9 905 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 PMM1Q92871 262 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 KIR3DX1Q9H7L2 352 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
CDH1-201ENST00000261769 WRBO00258 174 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
CDH1-201ENST00000261769 ITGA5P08648 1049 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 H2BFMP0C1H6 154 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 IMPA1P29218 277 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 BCAP31P51572 246 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 AQP4P55087 323 aa13.17□□□□□ -0.3
CDH1-201ENST00000261769 EEF1A2Q05639 463 aaKnown RBP13.17□□□□□ -0.3
CDH1-201ENST00000261769 ZNF99A8MXY4 864 aaPredicted RBP13.17□□□□□ -0.3
CDH1-201ENST00000261769 LDB3O75112 727 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms