RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 IGLV4-3A0A075B6K6 122 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 NDUFS8O00217 210 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 SLC28A1O00337 649 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 POLR2DO15514 142 aaKnown RBP3.62□□□□□ -1.83
CCDC54-201ENST00000261058 CHRNGP07510 517 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 CCDC130P13994 396 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 CPA3P15088 417 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 B4GALT1P15291 398 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 GPX3P22352 226 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 ACP1P24666 158 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 PTPN4P29074 926 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 SFNP31947 248 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 OTX2P32243 289 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 PTGER3P43115 390 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 PSMD7P51665 324 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 SMSP52788 366 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 ARPC4P59998 168 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 BASP1P80723 227 aaKnown RBP3.62□□□□□ -1.83
CCDC54-201ENST00000261058 BNIP1Q12981 228 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 PDZK1IP1Q13113 114 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 DDX39BQ13838 428 aaKnown RBP3.62□□□□□ -1.83
CCDC54-201ENST00000261058 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 METTL11BQ5VVY1 283 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 Q71RC1 249 aaPredicted RBP3.62□□□□□ -1.83
CCDC54-201ENST00000261058 ARMCX2Q7L311 632 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 ZNF679Q8IYX0 411 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 Q8N377 158 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 BBOF1Q8ND07 529 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 EXOC6Q8TAG9 804 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 UBTD2Q8WUN7 234 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 ANKRD7Q92527 254 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 GLYATL1Q969I3 302 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 NABP1Q96AH0 204 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 SLCO4A1Q96BD0 722 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 C19orf60Q96EN9 201 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 TPD52L3Q96J77 140 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 RAB40CQ96S21 281 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 AGPAT1Q99943 283 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 VGLL1Q99990 258 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 TPPP3Q9BW30 176 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 CCSER1Q9C0I3 900 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 GORASP2Q9H8Y8 452 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 KCNMB3Q9NPA1 279 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.62□□□□□ -1.83
CCDC54-201ENST00000261058 TECRQ9NZ01 308 aaKnown RBP3.62□□□□□ -1.83
CCDC54-201ENST00000261058 TSPAN16Q9UKR8 245 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 NAALAD2Q9Y3Q0 740 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 SCRIBQ14160 1630 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 KANK1Q14678 1352 aa3.62□□□□□ -1.83
CCDC54-201ENST00000261058 LOC100653049A0A140TA62 436 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 A0A1B0GU03 582 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 TRIM49BA6NDI0 452 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ASB14A6NK59 587 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ZNF724A8MTY0 619 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PRDM1O75626 825 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 KRT34O76011 436 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 RHOBTB1O94844 696 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SORBS2O94875 1100 aaKnown RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PRAMEF12O95522 483 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 TXNDC12O95881 172 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 GAS8O95995 478 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 AK1P00568 194 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 IGHG1P01857 330 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SERPINB2P05120 415 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 FHP07954 510 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 GSTA2P09210 222 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CCNHP51946 323 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 RIPK4P57078 832 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 DR1Q01658 176 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 TSTA3Q13630 321 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 HEPACAMQ14CZ8 416 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 SNAI3Q3KNW1 292 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CCDC14Q49A88 953 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CFAP221Q4G0U5 840 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 FBXO48Q5FWF7 155 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ZNF343Q6P1L6 599 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 C1orf186Q6ZWK4 172 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 AMZ2Q86W34 360 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 WDR49Q8IV35 697 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 BATF2Q8N1L9 274 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PDCL2Q8N4E4 241 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CCDC197Q8NCU1 140 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 STEAP2Q8NFT2 490 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 TCP11Q8WWU5 503 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 RAPGEF5Q92565 580 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 ZNF274Q96GC6 653 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 NSMCE2Q96MF7 247 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 MTMR9Q96QG7 549 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 CARD6Q9BX69 1037 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PUS3Q9BZE2 481 aaKnown RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 WWP1Q9H0M0 922 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 TRPV6Q9H1D0 765 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 TUBB1Q9H4B7 451 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 DPEP3Q9H4B8 488 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 XKR8Q9H6D3 395 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 C8orf33Q9H7E9 229 aaPredicted RBP3.61□□□□□ -1.83
CCDC54-201ENST00000261058 MARCH7Q9H992 704 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 NMUR1Q9HB89 426 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 PARVGQ9HBI0 331 aa3.61□□□□□ -1.83
CCDC54-201ENST00000261058 FAM114A2Q9NRY5 505 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms