RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 HMX3A6NHT5 357 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 FAM170BA6NMN3 283 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 EIF3FO00303 357 aaPredicted RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 YES1P07947 543 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 SLC6A11P48066 632 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 RPS7P62081 194 aaKnown RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ILKQ13418 452 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 VWA5B2Q8N398 1253 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 KREMEN2Q8NCW0 462 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 OR8K5Q8NH50 307 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 TEX47Q8TBZ9 253 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 TM4SF18Q96CE8 201 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 PDXPQ96GD0 296 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 MGAT4BQ9UQ53 548 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 GPR55Q9Y2T6 319 aaPredicted RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 C12orf71A8MTZ7 269 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 LCMT2O60294 686 aaKnown RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 MAP2K3P46734 347 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 EFR3AQ14156 821 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 SDE2Q6IQ49 451 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 SYT9Q86SS6 491 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 SLC39A11Q8N1S5 342 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 NEIL3Q8TAT5 605 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ZBED6CLQ96FA7 236 aaPredicted RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 CPEB1Q9BZB8 566 aaKnown RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 SAP130Q9H0E3 1048 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 C3orf14Q9HBI5 128 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 A4GNTQ9UNA3 340 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ZFR2Q9UPR6 939 aaKnown RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ALPK3Q96L96 1907 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 A0A075B6Q4 140 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 FAAHO00519 579 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 POLR1CO15160 346 aaPredicted RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 CHRNB1P11230 501 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF30P17039 623 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 MTNR1AP48039 350 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 SLC9A3P48764 834 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 WNT4P56705 351 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 FNDC3BQ53EP0 1204 aaKnown RBP12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF805Q5CZA5 627 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 PRICKLE2Q7Z3G6 844 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 PROKR2Q8NFJ6 384 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 OR8D4Q8NGM9 314 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 UFD1Q92890 307 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF354BQ96LW1 612 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 KLHL31Q9H511 634 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 SPHK2Q9NRA0 654 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 PTGFRNQ9P2B2 879 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 ENOPH1Q9UHY7 261 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
PGBD1-201ENST00000259883 TRIOO75962 3097 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 WDR87Q6ZQQ6 2873 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 PGRMC2O15173 223 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 PIP5K1CO60331 668 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 SCO1O75880 301 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 PAHP00439 452 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 HMGN2P05204 90 aaKnown RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 DDCP20711 480 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 PPP2R1BP30154 601 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 HOXD11P31277 338 aaPredicted RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 EVI2BP34910 448 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 IRS1P35568 1242 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 ETV6P41212 452 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 CLCNKAP51800 687 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 CDH11P55287 796 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 KRT33BQ14525 404 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 KHDRBS2Q5VWX1 349 aaKnown RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 CAMKMTQ7Z624 323 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 BEST4Q8NFU0 473 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 OR6C4Q8NGE1 309 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 DEDD2Q8WXF8 326 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 MAGEB10Q96LZ2 347 aaPredicted RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 SECISBP2Q96T21 854 aaKnown RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 DPH7Q9BTV6 452 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF624Q9P2J8 865 aaPredicted RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 A0A0X1KG70 313 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 HIDE1A8MVS5 230 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 E9PQ18 207 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 SOCS6O14544 535 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 MAGEB4O15481 346 aaPredicted RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 CHRM4P08173 479 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 C6P13671 934 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 AHRP35869 848 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 DDOSTP39656 456 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 KCNJ5P48544 419 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 SRP9P49458 86 aaKnown RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 HMGA2P52926 109 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 LIMK1P53667 647 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 ST8SIA6P61647 398 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 ID2Q02363 134 aa12.47□□□□□ -0.41
PGBD1-201ENST00000259883 MLLT11Q13015 90 aaPredicted RBP12.47□□□□□ -0.41
PGBD1-201ENST00000259883 ZDHHC20Q5W0Z9 365 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms