RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 POLR2IP36954 125 aaKnown RBP17.69■□□□□ 0.42
TRIM47-201ENST00000254816 RAB39AQ14964 217 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 IFI44LQ53G44 452 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 GARNL3Q5VVW2 1013 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 ZNF574Q6ZN55 896 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-201ENST00000254816 PRR23CQ6ZRP0 262 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 TTLL10Q6ZVT0 673 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 OR5K1Q8NHB7 308 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 ADAMTS16Q8TE57 1224 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 LZICQ8WZA0 190 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 OSBPL10Q9BXB5 764 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 SYNDIG1Q9H7V2 258 aa17.69■□□□□ 0.42
TRIM47-201ENST00000254816 TMEM247A6NEH6 219 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 TMX2-CTNND1H3BSU7 103 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 TGFBR3LH3BV60 316 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 HS6ST1O60243 411 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 HPRP00739 348 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 IFNA14P01570 189 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 CHRM4P08173 479 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 HOXB6P17509 224 aaKnown RBP17.68■□□□□ 0.42
TRIM47-201ENST00000254816 ALAS2P22557 587 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 AVPR1BP47901 424 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 MAN2A2P49641 1150 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 CCL7P80098 99 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 PPP2R2BQ00005 443 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 SLC13A2Q13183 592 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 GRM7Q14831 915 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 ERI1Q8IV48 349 aaKnown RBP17.68■□□□□ 0.42
TRIM47-201ENST00000254816 ALDH16A1Q8IZ83 802 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 D2HGDHQ8N465 521 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 SGCDQ92629 289 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 CXorf21Q9HAI6 301 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 FAM118AQ9NWS6 357 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 NDOR1Q9UHB4 597 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 A0A1W2PQM1 296 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 JRKO75564 520 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 MFN2O95140 757 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 ATP1B1P05026 303 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 CNR2P34972 360 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 BTG2P78543 158 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 ANGPT1Q15389 498 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 GPAT3Q53EU6 434 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 PIWIL3Q7Z3Z3 882 aaKnown RBP17.68■□□□□ 0.42
TRIM47-201ENST00000254816 OR2L13Q8N349 312 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 SLC16A11Q8NCK7 471 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 MIPOL1Q8TD10 442 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.68■□□□□ 0.42
TRIM47-201ENST00000254816 C12orf43Q96C57 262 aaKnown RBP17.68■□□□□ 0.42
TRIM47-201ENST00000254816 SLC41A2Q96JW4 573 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 COL21A1Q96P44 957 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 ADNPQ9H2P0 1102 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 CUTCQ9NTM9 273 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 DHCR7Q9UBM7 475 aaKnown RBP17.68■□□□□ 0.42
TRIM47-201ENST00000254816 SLC6A14Q9UN76 642 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 PADI2Q9Y2J8 665 aa17.68■□□□□ 0.42
TRIM47-201ENST00000254816 ARHGAP33O14559 1287 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 RECKO95980 971 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 OR1D4P47884 311 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 HLCSP50747 726 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 SKP1P63208 163 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 ELOAQ14241 798 aaKnown RBP17.67■□□□□ 0.42
TRIM47-201ENST00000254816 EXOSC7Q15024 291 aaKnown RBP17.67■□□□□ 0.42
TRIM47-201ENST00000254816 PRICKLE4Q2TBC4 344 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 C11orf91Q3C1V1 193 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 INAVAQ3KP66 663 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 GPR107Q5VW38 600 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 MFSD12Q6NUT3 480 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 PRSS42Q7Z5A4 293 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 LGI4Q8N135 537 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 SVOPLQ8N434 492 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 ZBTB44Q8NCP5 570 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 RCBTB1Q8NDN9 531 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 GPR32P1Q8NGA4 272 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 OR6C4Q8NGE1 309 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 OR51Q1Q8NH59 317 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 CEP76Q8TAP6 659 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 SLC9A6Q92581 669 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 SLC35A4Q96G79 324 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 MS4A4EQ96PG1 132 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 DCUN1D5Q9BTE7 237 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 ACTRT3Q9BYD9 372 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 ADAP2Q9NPF8 381 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 THUMPD1Q9NXG2 353 aaKnown RBP17.67■□□□□ 0.42
TRIM47-201ENST00000254816 MAT2BQ9NZL9 334 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 NDUFAF4Q9P032 175 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 SEMA5BQ9P283 1151 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 FER1L5A0AVI2 2057 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 J3KTA2 159 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 RPLP0P05388 317 aaKnown RBP17.67■□□□□ 0.42
TRIM47-201ENST00000254816 CDK4P11802 303 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 PNLIPP16233 465 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 CD247P20963 164 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 PPP2R1BP30154 601 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 TPD52P55327 224 aaPredicted RBP17.67■□□□□ 0.42
TRIM47-201ENST00000254816 ITGA1P56199 1179 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 KCNAB2Q13303 367 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 FHL5Q5TD97 284 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 SLC23A3Q6PIS1 610 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 THAP5Q7Z6K1 395 aa17.67■□□□□ 0.42
TRIM47-201ENST00000254816 ARMC8Q8IUR7 673 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms