RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CEACAM19Q7Z692 300 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 FTMTQ8N4E7 242 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 URM1Q9BTM9 101 aaKnown RBP18.01■□□□□ 0.47
PTPRE-201ENST00000254667 GJD2Q9UKL4 321 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 NOP16Q9Y3C1 178 aaKnown RBP18.01■□□□□ 0.47
PTPRE-201ENST00000254667 CAPN3P20807 821 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 NAA10P41227 235 aaPredicted RBP18.01■□□□□ 0.47
PTPRE-201ENST00000254667 HSD11B2P80365 405 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 MS4A15Q8N5U1 240 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 SLC41A3Q96GZ6 507 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 PDLIM5Q96HC4 596 aaKnown RBP18.01■□□□□ 0.47
PTPRE-201ENST00000254667 CCDC115Q96NT0 180 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 ARMC1Q9NVT9 282 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 SRPK3Q9UPE1 567 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 LATO43561 262 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 PCGF2P35227 344 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 UGT2B10P36537 528 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 TMPRSS9Q7Z410 1059 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 SAMD12Q8N8I0 201 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 FAM174AQ8TBP5 190 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 DIO2Q92813 273 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF696Q9H7X3 374 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 SRA1Q9HD15 236 aaKnown RBP18.01■□□□□ 0.47
PTPRE-201ENST00000254667 NUDT15Q9NV35 164 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 EXTL2Q9UBQ6 330 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 SOCS7O14512 581 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 SLC6A8P48029 635 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 IER5LQ5T953 404 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 SLC37A3Q8NCC5 494 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 PROKR1Q8TCW9 393 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 RNF38Q9H0F5 515 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 KCNK13Q9HB14 408 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 MYNNQ9NPC7 610 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 PCDHGA7Q9Y5G6 932 aa18.01■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF182P17025 639 aaPredicted RBP18■□□□□ 0.47
PTPRE-201ENST00000254667 PYCR1P32322 319 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 CASP6P55212 293 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 TMEM151BQ8IW70 566 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 RFT1Q96AA3 541 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 ACOT7O00154 380 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 CKMT1AP12532 417 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 PRLHRP49683 370 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 MRPS21P82921 87 aaKnown RBP18■□□□□ 0.47
PTPRE-201ENST00000254667 CPZQ66K79 652 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 CREB3L4Q8TEY5 395 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 PGAM5Q96HS1 289 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 EVA1AQ9H8M9 152 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 CLEC4EQ9ULY5 219 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 RBMX2Q9Y388 322 aaKnown RBP18■□□□□ 0.47
PTPRE-201ENST00000254667 CHD4Q14839 1912 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 BLACEA4D250 179 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 OR6C70A6NIJ9 312 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 AURKAO14965 403 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 CASC3O15234 703 aaKnown RBP18■□□□□ 0.47
PTPRE-201ENST00000254667 OSMP13725 252 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 ALG10Q5BKT4 473 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 TMED4Q7Z7H5 227 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF100Q8IYN0 542 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 KLHDC9Q8NEP7 349 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 ASB15Q8WXK1 588 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 TTTY10Q9BZA0 68 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 SH2B3Q9UQQ2 575 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 SDC3O75056 442 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 GPR4P46093 362 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 ALOXE3Q9BYJ1 711 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 SMURF1Q9HCE7 757 aa18■□□□□ 0.47
PTPRE-201ENST00000254667 RAD51DO75771 328 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 NEIL2Q969S2 332 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 BORCS8Q96FH0 119 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 J3QRK9 145 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 FMO6PO60774 539 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 RGS9O75916 674 aaPredicted RBP17.99■□□□□ 0.47
PTPRE-201ENST00000254667 CERS1P27544 350 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 MAP2K4P45985 399 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 SELENOWP63302 87 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 LHFPL3Q86UP9 236 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 OR13J1Q8NGT2 312 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 SNIP1Q8TAD8 396 aaKnown RBP17.99■□□□□ 0.47
PTPRE-201ENST00000254667 PINK1Q9BXM7 581 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 HCFC2Q9Y5Z7 792 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 MYH3P11055 1940 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 TRBV2A0A0J9YWF9 115 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 CEBPGP53567 150 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 IRF4Q15306 451 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 PAQR9Q6ZVX9 377 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 VTCN1Q7Z7D3 282 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 ZER1Q7Z7L7 766 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 GALNT10Q86SR1 603 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 NAGSQ8N159 534 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 DENND6BQ8NEG7 585 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 TCEAL4Q96EI5 215 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 PCDHA9Q9Y5H5 950 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 A0A1B0GVC2 190 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 CIB4A0PJX0 185 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 TTLL8A6PVC2 850 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 ARNTLO00327 626 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 LRRTM2O43300 516 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 CD63P08962 238 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 SERPINA11Q86U17 422 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 TRIM73Q86UV7 250 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms