RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CTAG2O75638 210 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 OR4F21O95013 312 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 KRT6AP02538 564 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 KRT6BP04259 564 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 SBK3P0C264 359 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 HSD3B1P14060 373 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 BMP7P18075 431 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 HSD3B2P26439 372 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 KRT6CP48668 564 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 CLCQ05315 142 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 SNTA1Q13424 505 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 EXOSC7Q15024 291 aaKnown RBP19.24■□□□□ 0.67
NEDD8-201ENST00000250495 EIPR1Q53HC9 387 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 NSUN5P2Q63ZY6 315 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 C1orf52Q8N6N3 182 aaKnown RBP19.24■□□□□ 0.67
NEDD8-201ENST00000250495 RELL2Q8NC24 303 aaPredicted RBP19.24■□□□□ 0.67
NEDD8-201ENST00000250495 NOA1Q8NC60 698 aaKnown RBP19.24■□□□□ 0.67
NEDD8-201ENST00000250495 UHMK1Q8TAS1 419 aaKnown RBP19.24■□□□□ 0.67
NEDD8-201ENST00000250495 RNASE6Q93091 150 aaKnown RBP19.24■□□□□ 0.67
NEDD8-201ENST00000250495 ABTB1Q969K4 478 aaPredicted RBP19.24■□□□□ 0.67
NEDD8-201ENST00000250495 CTHRC1Q96CG8 243 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 OMA1Q96E52 524 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 ITPAQ9BY32 194 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 EXPH5Q8NEV8 1989 aa19.24■□□□□ 0.67
NEDD8-201ENST00000250495 CD8B2A6NJW9 211 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 BCAS2O75934 225 aaPredicted RBP19.23■□□□□ 0.67
NEDD8-201ENST00000250495 SUPT7LO94864 414 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 DRD5P21918 477 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 PTPN6P29350 595 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 GCKP35557 465 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 PPICP45877 212 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 ALDH9A1P49189 494 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 PLCXD2Q0VAA5 305 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 RASA2Q15283 850 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 NNATQ16517 81 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 FBXL19-AS1Q494R0 122 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 WIPI1Q5MNZ9 446 aaPredicted RBP19.23■□□□□ 0.67
NEDD8-201ENST00000250495 ANGPTL8Q6UXH0 198 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 MMP21Q8N119 569 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 NAXEQ8NCW5 288 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 ADCY4Q8NFM4 1077 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 HGDQ93099 445 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 WDYHV1Q96HA8 205 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 UGT2B28Q9BY64 529 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 POLDIP3Q9BY77 421 aaKnown RBP19.23■□□□□ 0.67
NEDD8-201ENST00000250495 ZNF225Q9UK10 706 aa19.23■□□□□ 0.67
NEDD8-201ENST00000250495 EXOC1LA0A1B0GW35 172 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 MANBAO00462 879 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 ICOSLGO75144 302 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 ULK1O75385 1050 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 ESRRBO95718 433 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 CBX7O95931 251 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 ACTL6AO96019 429 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 RHOXF2BP0C7M4 288 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 CTAGE8P0CG41 777 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 ECHS1P30084 290 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 CSTF3Q12996 717 aaKnown RBP19.22■□□□□ 0.67
NEDD8-201ENST00000250495 SNTB1Q13884 538 aaKnown RBP19.22■□□□□ 0.67
NEDD8-201ENST00000250495 TRMT12Q53H54 448 aaKnown RBP19.22■□□□□ 0.67
NEDD8-201ENST00000250495 TIFABQ6ZNK6 161 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 MTERF4Q7Z6M4 381 aaKnown RBP19.22■□□□□ 0.67
NEDD8-201ENST00000250495 LCA5Q86VQ0 697 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 CTAGE4Q8IX94 777 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 CDYL2Q8N8U2 506 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 OR52R1Q8NGF1 315 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 NINJ1Q92982 152 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 MTBPQ96DY7 904 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 CNRIP1Q96F85 164 aaPredicted RBP19.22■□□□□ 0.67
NEDD8-201ENST00000250495 ZNF681Q96N22 645 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 TRIB1Q96RU8 372 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 NODALQ96S42 347 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 SH3GL2Q99962 352 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 OSBPL11Q9BXB4 747 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 CALHM2Q9HA72 323 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 KLRF1Q9NZS2 232 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 CRIM1Q9NZV1 1036 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 MCM8Q9UJA3 840 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 UTS2RQ9UKP6 389 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 EDARQ9UNE0 448 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 EXO1Q9UQ84 846 aaKnown RBP19.22■□□□□ 0.67
NEDD8-201ENST00000250495 PLLPQ9Y342 182 aa19.22■□□□□ 0.67
NEDD8-201ENST00000250495 KDM4EB2RXH2 506 aaPredicted RBP19.21■□□□□ 0.67
NEDD8-201ENST00000250495 SNPHO15079 494 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 TO15178 435 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 CBR3O75828 277 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 DRD2P14416 443 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 EMDP50402 254 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 IST1P53990 364 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 NAGLUP54802 743 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 WNT3P56703 355 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 RCAN2Q14206 197 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 UNC50Q53HI1 259 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 ZNF678Q5SXM1 525 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 POMZP3Q6PJE2 187 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 YRDCQ86U90 279 aaKnown RBP19.21■□□□□ 0.67
NEDD8-201ENST00000250495 SAMD14Q8IZD0 417 aaPredicted RBP19.21■□□□□ 0.67
NEDD8-201ENST00000250495 GBP7Q8N8V2 638 aaPredicted RBP19.21■□□□□ 0.67
NEDD8-201ENST00000250495 FAM83FQ8NEG4 500 aaPredicted RBP19.21■□□□□ 0.67
NEDD8-201ENST00000250495 METTL6Q8TCB7 284 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 FAM222BQ8WU58 562 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms