RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 A0A1W2PRB8 838 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 CCDC182A6NF36 153 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 PLRG1O43660 514 aaKnown RBP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 CDRT1O95170 752 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 CLDN2P57739 230 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 TAS2R50P59544 299 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 SEC23BQ15437 767 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 ZNF658BQ4V348 819 aaPredicted RBP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 WDR53Q7Z5U6 358 aaPredicted RBP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 APOBEC4Q8WW27 367 aaKnown RBP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 SLC17A9Q9BYT1 436 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 SLA2Q9H6Q3 261 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 WDR26Q9H7D7 661 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 ABCB9Q9NP78 766 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 ZMAT5Q9UDW3 170 aaKnown RBP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 MGAT4BQ9UQ53 548 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 QSOX1O00391 747 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 MYL12BO14950 172 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 C1DQ13901 141 aaKnown RBP16.02■□□□□ 0.16
FOXA1-201ENST00000250448 CCINQ13939 588 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 RPS26P11Q5JNZ5 115 aaPredicted RBP16.02■□□□□ 0.16
FOXA1-201ENST00000250448 LIPKQ5VXJ0 399 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 REEP3Q6NUK4 255 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 PAQR6Q6TCH4 344 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 CASP12Q6UXS9 341 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 ADAMTSL4Q6UY14 1074 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 NOXA1Q86UR1 476 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 PHC2Q8IXK0 858 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 TP53I13Q8NBR0 393 aaPredicted RBP16.02■□□□□ 0.16
FOXA1-201ENST00000250448 PROKR2Q8NFJ6 384 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 SLC25A46Q96AG3 418 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 MIXL1Q9H2W2 232 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 OR51B5Q9H339 312 aa16.02■□□□□ 0.16
FOXA1-201ENST00000250448 NUFIP1Q9UHK0 495 aaKnown RBP16.02■□□□□ 0.16
FOXA1-201ENST00000250448 H3BN98 237 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 YES1P07947 543 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 ACADMP11310 421 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 XKP51811 444 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 RPS21P63220 83 aaKnown RBP16.02■□□□□ 0.15
FOXA1-201ENST00000250448 GPAT3Q53EU6 434 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 XKRXQ6PP77 449 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 VWA5B2Q8N398 1253 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 C2orf73Q8N5S3 287 aaPredicted RBP16.02■□□□□ 0.15
FOXA1-201ENST00000250448 C11orf54Q9H0W9 315 aaPredicted RBP16.02■□□□□ 0.15
FOXA1-201ENST00000250448 RANGRFQ9HD47 186 aaPredicted RBP16.02■□□□□ 0.15
FOXA1-201ENST00000250448 SH2B3Q9UQQ2 575 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 PLEKHM1Q9Y4G2 1056 aa16.02■□□□□ 0.15
FOXA1-201ENST00000250448 H0Y8X5 98 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 FOXE1O00358 373 aaPredicted RBP16.01■□□□□ 0.15
FOXA1-201ENST00000250448 KLHL18O94889 574 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 TGFB1P01137 390 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 CSF3P09919 207 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 ELAVL4P26378 380 aaKnown RBP16.01■□□□□ 0.15
FOXA1-201ENST00000250448 TBPL1P62380 186 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 HNRNPA0Q13151 305 aaKnown RBP16.01■□□□□ 0.15
FOXA1-201ENST00000250448 RNLSQ5VYX0 342 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 BCDIN3DQ7Z5W3 292 aaKnown RBP16.01■□□□□ 0.15
FOXA1-201ENST00000250448 RDH10Q8IZV5 341 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 HLA-CQ95604 372 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 PRDM6Q9NQX0 595 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 TXNL4BQ9NX01 149 aaKnown RBP16.01■□□□□ 0.15
FOXA1-201ENST00000250448 PLAGL1Q9UM63 463 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 PLD2O14939 933 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 OR10H3O60404 316 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 IL1AP01583 271 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 PRKCAP17252 672 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 IGFALSP35858 605 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 SNAP47Q5SQN1 464 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 PTCRAQ6ISU1 281 aaPredicted RBP16.01■□□□□ 0.15
FOXA1-201ENST00000250448 TCEANCQ8N8B7 351 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 OR8J1Q8NGP2 316 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 MTERF3Q96E29 417 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 FYTTD1Q96QD9 318 aaKnown RBP16.01■□□□□ 0.15
FOXA1-201ENST00000250448 C1QTNF2Q9BXJ5 285 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 NINQ8N4C6 2090 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 PIPSLA2A3N6 862 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 B4DXG7 233 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 C5orf58C9J3I9 102 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 FAAHO00519 579 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 LGI1O95970 557 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 CLEC2LP0C7M8 214 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 FOSL2P15408 326 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 MYL9P24844 172 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 MRPS21P82921 87 aaKnown RBP16.01■□□□□ 0.15
FOXA1-201ENST00000250448 DCST1Q5T197 706 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 ZNF438Q7Z4V0 828 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 CREB3L4Q8TEY5 395 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 FOPNLQ96NB1 174 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 EFCAB11Q9BUY7 163 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 CXorf36Q9H7Y0 433 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 DYRK1BQ9Y463 629 aa16.01■□□□□ 0.15
FOXA1-201ENST00000250448 POM121BA6NF01 834 aa16■□□□□ 0.15
FOXA1-201ENST00000250448 ALX3O95076 343 aa16■□□□□ 0.15
FOXA1-201ENST00000250448 IL3P08700 152 aa16■□□□□ 0.15
FOXA1-201ENST00000250448 GABRG2P18507 467 aa16■□□□□ 0.15
FOXA1-201ENST00000250448 UQCRC2P22695 453 aa16■□□□□ 0.15
FOXA1-201ENST00000250448 GSTM5P46439 218 aa16■□□□□ 0.15
FOXA1-201ENST00000250448 HEPACAMQ14CZ8 416 aa16■□□□□ 0.15
FOXA1-201ENST00000250448 SMAD2Q15796 467 aaKnown RBP16■□□□□ 0.15
FOXA1-201ENST00000250448 PDZK1Q5T2W1 519 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms