RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 KDELC1Q6UW63 502 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CBLL1Q75N03 491 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 SMIM15Q7Z3B0 74 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 DUSP18Q8NEJ0 188 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ACVR1CQ8NER5 493 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CASTOR1Q8WTX7 329 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 TSEN15Q8WW01 171 aaKnown RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 UBE2FQ969M7 185 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 SCGB3A2Q96PL1 93 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 NMNAT1Q9HAN9 279 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ARL5AQ9Y689 179 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 FZD9O00144 591 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 GABRPO00591 440 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 HLA-DQB2P05538 268 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 NQO2P16083 231 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CLCN7P51798 805 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CACNG1Q06432 222 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CHIT1Q13231 466 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF124Q15973 351 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ADAM5Q6NVV9 412 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 NAXDQ8IW45 347 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 OR5D16Q8NGK9 328 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 BRIX1Q8TDN6 353 aaKnown RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 GNPDA2Q8TDQ7 276 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CA5BP1Q8WTZ4 195 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 XAGE5Q8WWM1 108 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 OSTF1Q92882 214 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 BABAM2Q9NXR7 383 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 PURGQ9UJV8 347 aaKnown RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 BORCS7-ASMTA0A0B4J1R7 106 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 SLC34A2O95436 690 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ARF4P18085 180 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ARL2P36404 184 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 STK19P49842 368 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 DGKZQ13574 1117 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CERS6Q6ZMG9 384 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 SLC9B2Q86UD5 537 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 SERPINA12Q8IW75 414 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 FCRL2Q96LA5 508 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 SEMA4CQ9C0C4 833 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 COMMD4Q9H0A8 199 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CDCP1Q9H5V8 836 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 RDH14Q9HBH5 336 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 NDUFB11Q9NX14 153 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CFAP97Q9P2B7 532 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF705FA8MVS1 300 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 TREHO43280 583 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF705DP0CH99 300 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF705BP0CI00 300 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 RPL4P36578 427 aaKnown RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 PTH2RP49190 550 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 LUMP51884 338 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-201ENST00000236192 PRSS36Q5K4E3 855 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 MFSD14CQ5VZR4 134 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 APOOLQ6UXV4 268 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 STPG2Q8N412 459 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 LRRC52Q8N7C0 313 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 OR51G2Q8NGK0 314 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 LRFN5Q96NI6 719 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 CD244Q9BZW8 370 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 PCTPQ9UKL6 214 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 RCE1Q9Y256 329 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 RAI2Q9Y5P3 530 aa12.26□□□□□ -0.45
VAMP4-201ENST00000236192 A6NIN4 97 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 AGAP14A8MT82 685 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 LOC730098B7Z3J9 87 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 LILRB5O75023 590 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 PAGE1O75459 146 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 UBL3O95164 117 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 FPR3P25089 353 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 SELENOWP63302 87 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF616Q08AN1 781 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 SLC10A7Q0GE19 358 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 RNF151Q2KHN1 245 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 CATSPERGQ6ZRH7 1159 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 IQCHQ86VS3 1027 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 RGL4Q8IZJ4 473 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ARL14Q8N4G2 192 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 FAM86B1Q8N7N1 296 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 AHCYL2Q96HN2 611 aaKnown RBP12.25□□□□□ -0.45
VAMP4-201ENST00000236192 RAD9AQ99638 391 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 SLC39A8Q9C0K1 460 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF700Q9H0M5 742 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 EVA1AQ9H8M9 152 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 CH25HO95992 272 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 CATP04040 527 aaKnown RBP12.25□□□□□ -0.45
VAMP4-201ENST00000236192 HEXBP07686 556 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 PIPP12273 146 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-201ENST00000236192 RFX2P48378 723 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 PPT1P50897 306 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 DAOAP59103 153 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ENPP7Q6UWV6 458 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF852Q6ZMS4 543 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 DCUN1D4Q92564 292 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 VSX1Q9NZR4 365 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-201ENST00000236192 VPS29Q9UBQ0 182 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 ZNF223Q9UK11 482 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-201ENST00000236192 MEIKINA0A087WXM9 373 aa12.25□□□□□ -0.45
VAMP4-201ENST00000236192 S1PR4O95977 384 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms