RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 GKN3PP0CG01 181 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 CSF2RAP15509 400 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 JUNBP17275 347 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-201ENST00000226574 POLR2CP19387 275 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-201ENST00000226574 RPS19P39019 145 aaKnown RBP13.04□□□□□ -0.32
NFKB1-201ENST00000226574 WNT4P56705 351 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 PPP3R1P63098 170 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 PON3Q15166 354 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 MEDAGQ5VYS4 303 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 PODNL1Q6PEZ8 512 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 C17orf99Q6UX52 265 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 YIPF7Q8N8F6 280 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 OR52P1PQ8NH57 321 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 FIBINQ8TAL6 211 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 THEM6Q8WUY1 208 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF689Q96CS4 500 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-201ENST00000226574 TCEAL4Q96EI5 215 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 AHCYL2Q96HN2 611 aaKnown RBP13.04□□□□□ -0.32
NFKB1-201ENST00000226574 HRASLS5Q96KN8 279 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 ZIC5Q96T25 663 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 KLF16Q9BXK1 252 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-201ENST00000226574 DPH1Q9BZG8 443 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 AKAP7Q9P0M2 348 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-201ENST00000226574 COLEC10Q9Y6Z7 277 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
NFKB1-201ENST00000226574 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 XKRYO14609 159 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 TGM5O43548 720 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 B3GALT2O43825 422 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 TSPAN12O95859 305 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 IFNA6P05013 189 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF3P17036 446 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 EIF2DP41214 584 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 SLC19A1P41440 591 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 NDUFA9Q16795 377 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CCNJQ5T5M9 372 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 KDM4DQ6B0I6 523 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 WASH2PQ6VEQ5 465 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 GDPD3Q7L5L3 318 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 TRIM46Q7Z4K8 759 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 FOXRED2Q8IWF2 684 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 WDR20Q8TBZ3 569 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 OSTF1Q92882 214 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 PDLIM5Q96HC4 596 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 SAP130Q9H0E3 1048 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 PCBD2Q9H0N5 130 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF334Q9HCZ1 680 aaPredicted RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CUEDC1Q9NWM3 386 aaPredicted RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 USP36Q9P275 1121 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 KHNYNO15037 678 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 PEX11BO96011 259 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 IFNA7P01567 189 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 MT-ND5P03915 603 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 FBXO45P0C2W1 286 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 HSD3B1P14060 373 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 HSD3B2P26439 372 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 GRK6P43250 576 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 TOMM20Q15388 145 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 XAF1Q6GPH4 301 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 OR4K13Q8NH42 304 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CCDC32Q9BV29 185 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 SRA1Q9HD15 236 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CENPMQ9NSP4 180 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 FBXL12Q9NXK8 326 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 GRIP1Q9Y3R0 1128 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 MAU2Q9Y6X3 613 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 A0A1W2PP55 124 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 METTL15A6NJ78 407 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 M0R233 179 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 FLRT2O43155 660 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 IGLV3-25P01717 112 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 LHCGRP22888 699 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 FAUP35544 74 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 KCNC3Q14003 757 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 PRSS36Q5K4E3 855 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CYHR1Q6ZMK1 362 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 RIMKLAQ8IXN7 391 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CCDC120Q96HB5 630 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CCDC115Q96NT0 180 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 KXD1Q9BQD3 176 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 OR10A4Q9H209 315 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 ACTL8Q9H568 366 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 DDX31Q9H8H2 851 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 DMRT3Q9NQL9 472 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 RWDD3Q9Y3V2 267 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 IGLV3-10A0A075B6K4 115 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 OR2A25A4D2G3 310 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CACNG3O60359 315 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 RAD1O60671 282 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 RCBTB2O95199 551 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 ERP29P30040 261 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF542PQ5EBM4 170 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 CEP76Q8TAP6 659 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 SLC38A5Q8WUX1 472 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 ADAD1Q96M93 576 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 C5orf34Q96MH7 638 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 TMEM175Q9BSA9 504 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 MED20Q9H944 212 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms