RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 GXYLT1Q4G148 440 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF440Q8IYI8 595 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 VWA5B2Q8N398 1253 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 GPR150Q8NGU9 434 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 INSM2Q96T92 566 aaPredicted RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 CUEDC1Q9NWM3 386 aaPredicted RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 MEMO1Q9Y316 297 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 CBFA2T3O75081 653 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 GLP1RP43220 463 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 POU3F4P49335 361 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 CLCN2P51788 898 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 PIGFQ07326 219 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 FCRLBQ6BAA4 426 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 HMBOX1Q6NT76 420 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 SLITRK4Q8IW52 837 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 NAGSQ8N159 534 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 ARRDC2Q8TBH0 407 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 PROKR1Q8TCW9 393 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 RBM24Q9BX46 236 aaKnown RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 GAREM1Q9H706 876 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 SRPK3Q9UPE1 567 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 SLC22A1O15245 554 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 PRDX3P30048 256 aaKnown RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 HK3P52790 923 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 TAS2R43P59537 309 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 ST3GAL4Q11206 333 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 EXOSC7Q15024 291 aaKnown RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 SFT2D3Q587I9 215 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 LEG1Q6P5S2 330 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 PAQR7Q86WK9 346 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 SLC44A3Q8N4M1 653 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 OR5D16Q8NGK9 328 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 MTHFD2LQ9H903 347 aaPredicted RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 PCDH10Q9P2E7 1040 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 HTR1EP28566 365 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 ACVR1BP36896 505 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 PUDPQ08623 228 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 NKAIN2Q5VXU1 208 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 MAMDC2Q7Z304 686 aaPredicted RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 NRMQ8IXM6 262 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 GALNT15Q8N3T1 639 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 RNF175Q8N4F7 328 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 OR9A4Q8NGU2 314 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 CEP76Q8TAP6 659 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 ALS2Q96Q42 1657 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 GXYLT2A0PJZ3 443 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 FRS3O43559 492 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 PBX2P40425 430 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 MALLQ13021 153 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 STK11Q15831 433 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 RPE65Q16518 533 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 OR5M10Q6IEU7 315 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 ABHD5Q8WTS1 349 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 MS4A4EQ96PG1 132 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 TTYH1Q9H313 450 aaPredicted RBP17.49■□□□□ 0.39
CLIP2-201ENST00000223398 TIMMDC1Q9NPL8 285 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF69Q9UC07 566 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 PLCH1Q4KWH8 1693 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 RHCEP18577 417 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF33BQ06732 778 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 MGAT3Q09327 533 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 UEVLDQ8IX04 471 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 MUS81Q96NY9 551 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 DHDHQ9UQ10 334 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 G3V2L1 256 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 ABLIM1O14639 778 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 F8A1P23610 371 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 HERV-K104P61576 105 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 CLCA4Q14CN2 919 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 SPATS1Q496A3 300 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 SPERTQ8NA61 448 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 TESCQ96BS2 214 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 SLC7A6OSQ96CW6 309 aaPredicted RBP17.49■□□□□ 0.39
CLIP2-201ENST00000223398 RXFP3Q9NSD7 469 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 TRBV11-1A0A0K0K1C0 115 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 FAM171A2A8MVW0 826 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 FMO6PO60774 539 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 PYCR1P32322 319 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 CTXN1P60606 82 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 S100A10P60903 97 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 NADK2Q4G0N4 442 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 PCDHB16Q9NRJ7 776 aa17.49■□□□□ 0.39
CLIP2-201ENST00000223398 A0A0G2JPF8 293 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 HNRNPCL3B7ZW38 293 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 KLKB1P03952 638 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 HNRNPCL4P0DMR1 293 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 NDUFV2P19404 249 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 GDF1P27539 372 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 MAT1AQ00266 395 aaKnown RBP17.48■□□□□ 0.39
CLIP2-201ENST00000223398 ATP6AP1Q15904 470 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 TYSND1Q2T9J0 566 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 PRAMEF8Q5VWM4 474 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 PRAMEF7Q5VXH5 474 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 TRNP1Q6NT89 227 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF480Q8WV37 535 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 GAL3ST3Q96A11 431 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 SLC41A3Q96GZ6 507 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF701Q9NV72 531 aaPredicted RBP17.48■□□□□ 0.39
CLIP2-201ENST00000223398 RNF6Q9Y252 685 aa17.48■□□□□ 0.39
CLIP2-201ENST00000223398 TMA7Q9Y2S6 64 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms