RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 PHC2Q8IXK0 858 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 GALNT6Q8NCL4 622 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 FLCNQ8NFG4 579 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 OR52I1Q8NGK6 324 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 NR4A3Q92570 626 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 C16orf58Q96GQ5 468 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 TXNDC15Q96J42 360 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 ZNF582Q96NG8 517 aaPredicted RBP16.3■□□□□ 0.2
CLDN11-201ENST00000064724 CCDC32Q9BV29 185 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 KLHL3Q9UH77 587 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 ENTPD4Q9Y227 616 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 TRAPPC4Q9Y296 219 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 KCNE3Q9Y6H6 103 aa16.3■□□□□ 0.2
CLDN11-201ENST00000064724 HYKKA2RU49 373 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 EMC8O43402 210 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 PROM1O43490 865 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 ASNA1O43681 348 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 APODP05090 189 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 TIE1P35590 1138 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 BUD31P41223 144 aaPredicted RBP16.29■□□□□ 0.2
CLDN11-201ENST00000064724 SMSP52788 366 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 PRR5P85299 388 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 C1DQ13901 141 aaKnown RBP16.29■□□□□ 0.2
CLDN11-201ENST00000064724 RPE65Q16518 533 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 C18orf63Q68DL7 685 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 ZNF425Q6IV72 752 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 MFSD9Q8NBP5 474 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 LRR1Q96L50 414 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 ZNF681Q96N22 645 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 KCNS3Q9BQ31 491 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 SLC30A2Q9BRI3 323 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 BARHL1Q9BZE3 327 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 EXOSC4Q9NPD3 245 aaKnown RBP16.29■□□□□ 0.2
CLDN11-201ENST00000064724 FBXW2Q9UKT8 454 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 CHD9Q3L8U1 2897 aa16.29■□□□□ 0.2
CLDN11-201ENST00000064724 A0A087WUU8 490 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 PDZK1P1A8MUH7 402 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 RAB36O95755 333 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 ALPPL2P10696 532 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 TNFSF8P32971 234 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 MPIP34949 423 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 PTGER1P34995 402 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 GAS1P54826 345 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 PAQR6Q6TCH4 344 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 TMEM107Q6UX40 140 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 NUDT18Q6ZVK8 323 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 KIF18BQ86Y91 864 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 CACTIN-AS1Q8N1I8 211 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 FAM131CQ96AQ9 280 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 TRMT61AQ96FX7 289 aaKnown RBP16.28■□□□□ 0.2
CLDN11-201ENST00000064724 SCARF2Q96GP6 870 aaPredicted RBP16.28■□□□□ 0.2
CLDN11-201ENST00000064724 ARHGDIGQ99819 225 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 PLA2G2FQ9BZM2 168 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 SLC38A1Q9H2H9 487 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 SYNPO2LQ9H987 977 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 SPHK1Q9NYA1 384 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 LIPT1Q9Y234 373 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 CAB39Q9Y376 341 aaPredicted RBP16.28■□□□□ 0.2
CLDN11-201ENST00000064724 MYL12BO14950 172 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 DLGAP3O95886 979 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 CERS1P27544 350 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 GPAT3Q53EU6 434 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 C3orf38Q5JPI3 329 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 HMGN2P46Q86SG4 172 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 TMEM145Q8NBT3 493 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 ELP4Q96EB1 424 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 OR7D2Q96RA2 312 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 SLC17A9Q9BYT1 436 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 KIR3DX1Q9H7L2 352 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 SMURF1Q9HCE7 757 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 SACM1LQ9NTJ5 587 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 APOBEC3BQ9UH17 382 aaKnown RBP16.28■□□□□ 0.2
CLDN11-201ENST00000064724 SNX7Q9UNH6 387 aa16.28■□□□□ 0.2
CLDN11-201ENST00000064724 A0A1W2PS29 197 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 CYP7B1O75881 506 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 C8orf89P0DMQ9 161 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 SPNP16150 400 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 CMPK1P30085 196 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 IGFALSP35858 605 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 RORCP51449 518 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 DEFA1P59665 94 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 DEFA3P59666 94 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 BNC1Q01954 994 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 SELENBP1Q13228 472 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 LRRC32Q14392 662 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 KLHL22Q53GT1 634 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 ZNF776Q68DI1 518 aaPredicted RBP16.27■□□□□ 0.2
CLDN11-201ENST00000064724 GDPD3Q7L5L3 318 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 GJD3Q8N144 294 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 OR9Q1Q8NGQ5 310 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 GNPDA2Q8TDQ7 276 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 ANKRD19PQ9H560 264 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 CALML5Q9NZT1 146 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 SSR3Q9UNL2 185 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 GPSM3Q9Y4H4 160 aa16.27■□□□□ 0.2
CLDN11-201ENST00000064724 C2orf16Q68DN1 1984 aa16.27■□□□□ 0.19
CLDN11-201ENST00000064724 A0A1W2PQU0 124 aa16.27■□□□□ 0.19
CLDN11-201ENST00000064724 SLC35F4A4IF30 521 aa16.27■□□□□ 0.19
CLDN11-201ENST00000064724 PLRG1O43660 514 aaKnown RBP16.27■□□□□ 0.19
CLDN11-201ENST00000064724 CA3P07451 260 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms