RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 DCAF7P61962 342 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 DCDP81605 110 aaKnown RBP9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 HYAL1Q12794 435 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 ATP6AP1Q15904 470 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 ZNF595Q8IYB9 648 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 JAGN1Q8N5M9 183 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 MAGIXQ9H6Y5 334 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 EIF3KQ9UBQ5 218 aaKnown RBP9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 ZNF222Q9UK12 451 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 TRAPPC13A5PLN9 417 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 HTR3EA5X5Y0 456 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 TLCD2A6NGC4 264 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 SAGE2PA6NJ88 616 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 S1PR1P21453 382 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 PRKACGP22612 351 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 EXOC3L2Q2M3D2 409 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 C14orf28Q4W4Y0 310 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 AFMIDQ63HM1 303 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 ARHGAP11AQ6P4F7 1023 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 GPALPP1Q8IXQ4 340 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 ZNF619Q8N2I2 560 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 RAB2BQ8WUD1 216 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 NANOS1Q8WY41 292 aaKnown RBP9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 KHSRPQ92945 711 aaKnown RBP eCLIP9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 GAL3ST1Q99999 423 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 C6orf106Q9H6K1 298 aaPredicted RBP9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 ARAP2Q8WZ64 1704 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 FTCDNL1E5RQL4 147 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 APOC1P02654 83 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 GPLD1P80108 840 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC3A1Q07837 685 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 E2F2Q14209 437 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 PLET1Q6UQ28 207 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 HMGN2P46Q86SG4 172 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 C15orf40Q8WUR7 153 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 OR6C1Q96RD1 312 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 CCNL2Q96S94 520 aaPredicted RBP9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 TXLNGYQ9BZA5 131 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 SNTG1Q9NSN8 517 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 CUEDC1Q9NWM3 386 aaPredicted RBP9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 ADAM29Q9UKF5 820 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 SATB2Q9UPW6 733 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 BAIAP2Q9UQB8 552 aa9.81□□□□□ -0.84
NIPAL3-201ENST00000003912 TRBV11-1A0A0K0K1C0 115 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 METTL21EPA6NDL7 271 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ANKRD28O15084 1053 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ENTPD6O75354 484 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 CD46P15529 392 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 RPL34P49207 117 aaKnown RBP9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 NUDT6P53370 316 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 INHBCP55103 352 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 HTRA4P83105 476 aaPredicted RBP9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 EEF1A2Q05639 463 aaKnown RBP9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ZNF627Q7L945 461 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 MARCH9Q86YJ5 346 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 OR9A4Q8NGU2 314 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ADAMTS19Q8TE59 1207 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 CAPSLQ8WWF8 208 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 CDC6Q99741 560 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 FOXQ1Q9C009 403 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 PIGUQ9H490 435 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 KCND3Q9UK17 655 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 MYH10P35580 1976 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 MYH7BA7E2Y1 1941 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 PRRT4C9JH25 899 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 SIGLEC6O43699 453 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ABCB7O75027 752 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 LDB3O75112 727 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 GPR75O95800 540 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 PNMTP11086 282 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 GMFBP60983 142 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ACTC1P68032 377 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ACTA1P68133 377 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 CBFBQ13951 182 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 RGNQ15493 299 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 TMEM184AQ6ZMB5 413 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ZBTB46Q86UZ6 589 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 UEVLDQ8IX04 471 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC44A3Q8N4M1 653 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 PSD4Q8NDX1 1056 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 OR14A16Q8NHC5 309 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 MACROD1Q9BQ69 325 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 MROQ9BYG7 248 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 KLHL21Q9UJP4 597 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ING4Q9UNL4 249 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 E2F3O00716 465 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 TBX10O75333 385 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 KDM4BO94953 1096 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 IGLV3-27P01718 113 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 CD36P16671 472 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 ZNF43P17038 809 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 PRKCAP17252 672 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 PRDX3P30048 256 aaKnown RBP9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 GCGRP47871 477 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 RAB38P57729 211 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 DMWDQ09019 674 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 GPR18Q14330 331 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 CCSAPQ6IQ19 270 aaPredicted RBP9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 SFXN5Q8TD22 340 aa9.8□□□□□ -0.84
NIPAL3-201ENST00000003912 DNAJA4Q8WW22 397 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms