RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ocel1Q8VCR9 219 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Il17rbQ9JIP3 499 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Dnajb1Q9QYJ3 340 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr613E9PYB4 317 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr549E9Q542 316 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vmn2r61L7N2B8 865 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rps13P62301 151 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 KcnrgQ2TUM3 264 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Macrod2Q3UYG8 475 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ube2j2Q6P073 259 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc45a1Q8BIV7 751 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Acp6Q8BP40 418 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Q8CF31 99 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Snx11Q91WL6 271 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Spaca7Q9D2S4 182 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Entpd4Q9DBT4 613 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Kcnip1Q9JJ57 227 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Mcm3apQ9WUU9 1971 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr294F7CWV4 335 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1136Q0VBI4 310 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 HgsnatQ3UDW8 656 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1046Q7TR79 316 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Arhgap19Q8BRH3 494 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 ClmpQ8R373 373 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cyp4f15Q99N18 534 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Actl11Q9D5V1 1207 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 ProdhQ9WU79 599 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Heatr1G3X9B1 2143 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Galnt1O08912 559 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cldn5O54942 218 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Creb1Q01147 341 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Galk2Q68FH4 458 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Dusp11Q6NXK5 321 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rgs7bpQ8BQP9 257 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 MaobQ8BW75 520 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Sec14l4Q8R0F9 403 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Elp2Q91WG4 831 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tmem135Q9CYV5 458 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rfx3P48381 749 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gdi1P50396 447 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Hsd11b2P51661 386 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr305Q7TS02 319 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Wipi2Q80W47 445 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Mgat4bQ812F8 548 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Asrgl1Q8C0M9 326 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Sfxn1Q99JR1 322 aa15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Btf3l4Q9CQH7 158 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Atxn7l3A2AWT3 347 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Hoxa9P09631 271 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cdk1P11440 297 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tmem231Q3U284 315 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vgll2Q8BGW8 322 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr539Q8VGL9 319 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Macc1E9PXX8 851 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cd14P10810 366 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Apoc3P33622 99 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Nfatc2Q60591 927 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc6a14Q9JMA9 638 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Kcnab2P62482 367 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Mat2aQ3THS6 395 aaKnown RBP15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tsr3Q5HZH2 323 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Camk2dQ6PHZ2 499 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1472Q7TQQ9 314 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Prrt4B2RU40 902 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Bnip3O55003 187 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Csn2P10598 231 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 TstP52196 297 aaKnown RBP15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Nadsyn1Q711T7 725 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tas2r143Q7TQB9 293 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gpr171Q8BG55 319 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Mchr1Q8JZL2 353 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pla1aQ8VI78 456 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Elp4Q9ER73 422 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Prps1l3G3UXL2 318 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ntrk2P15209 821 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Htr2aP35363 471 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc26a10Q5EBI0 492 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Plekhs1Q8BW88 474 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 H1fntQ8CJI4 398 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Prps1Q9D7G0 318 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Serinc1Q9QZI8 453 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rab5cP35278 216 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 IpmkQ7TT16 396 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1099Q8VG37 312 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Upk3bl1Q9D701 249 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rnf11Q9QYK7 154 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 CerklA2AQH1 525 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Btnl2O70355 454 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ankrd53Q3V0J4 497 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Nlgn2Q69ZK9 836 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fmo9Q8C116 539 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Spata33Q8C624 132 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Med9Q8VCS6 142 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tprg1lQ9DBS2 266 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Scamp5Q9JKD3 235 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 GghQ9Z0L8 317 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 4930455H04RikD3Z622 58 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 PrkcaP20444 672 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tap2P36371 702 aa15.88■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Clns1aQ61189 236 aa15.88■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms