RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Steap2Q8BWB6 489 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Q8C0X8 640 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mfsd6Q8CBH5 775 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Znf628Q8CJ78 1038 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Fahd1Q8R0F8 227 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tcf25Q8R3L2 676 aaKnown RBP12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ugt2b37Q8VCN3 530 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr656Q8VGX9 329 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Rnf181Q9CY62 165 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Hapln1Q9QUP5 356 aaKnown RBP12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 ItgaxQ9QXH4 1169 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mapk11Q9WUI1 364 aa12.74□□□□□ -0.37
Nup88-201ENSMUST00000035283 Trav1A0A075B5Z4 110 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm28557A0A087WQQ0 336 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zfp534A2A7A1 661 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zfp969A2ART2 485 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm21904A8HG57 180 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Adam3F8VQ03 822 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm21866J3QMH4 180 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cnih2O35089 160 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 AboP38649 332 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nkx3-2P97503 333 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Dgcr2P98154 548 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 CpeQ00493 476 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nell1Q2VWQ2 810 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm14226Q3TZL0 686 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Itgb2lQ3UV74 738 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pnliprp1Q5BKQ4 473 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 MeikinQ5F2C3 434 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 EngQ63961 653 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Scgb2b2Q6UGQ3 114 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr1140Q7TR39 311 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cox14Q8BH51 57 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nup107Q8BH74 926 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mtrf1Q8K126 446 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Swi5Q8K3D3 89 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 St7lQ8K4P7 559 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Oas3Q8VI93 1138 aaKnown RBP12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 SmoxQ99K82 555 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zbtb8aQ9CWH1 434 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 3110001I22RikQ9CZ70 312 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Actl11Q9D5V1 1207 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slamf9Q9D780 285 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tmem37Q9JJV3 211 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Hspb3Q9QZ57 154 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Serinc3Q9QZI9 472 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Spint1Q9R097 507 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Clec2iQ9WVF9 217 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Baz2aQ91YE5 1889 aaKnown RBP12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 PtprsB0V2N1 1907 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 MylkQ6PDN3 1941 aaKnown RBP12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Igkv10-94A0A075B5L1 115 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm7792A0A0J9YU01 481 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm44973A0A140LJJ1 189 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 CtcflA2APF3 636 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Clip3B9EHT4 547 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm3183D3YUJ6 481 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc27a6E9Q9W4 619 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm3139J3QK78 481 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm3106J3QPH3 481 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nudt19P11930 357 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tcea3P23881 347 aaKnown RBP12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ppm1aP49443 382 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 TepsinQ3U3N6 573 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Wdr75Q3U821 830 aaKnown RBP12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Arhgef9Q3UTH8 516 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 EgflamQ4VBE4 1017 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc44a5Q5RJI2 710 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 PtprjQ64455 1238 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ablim3Q69ZX8 682 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mapre3Q6PER3 281 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nceh1Q8BLF1 408 aaKnown RBP12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ugt2a3Q8BWQ1 534 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Q8CF31 99 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sirt5Q8K2C6 310 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Defb19Q8K3I8 83 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Padi6Q8K3V4 682 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Agpat4Q8K4X7 378 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Defb35Q8R2I3 63 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr382Q8VF79 312 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr478Q8VG04 314 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gpx6Q91WR8 221 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Znf524Q9D0B1 321 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sars2Q9JJL8 518 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gdf2Q9WV56 428 aa12.73□□□□□ -0.37
Nup88-201ENSMUST00000035283 Glipr1l3A0A1W2P7V2 236 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 CerklA2AQH1 525 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ankle1A8VU90 534 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 L3mbtl4B1B1A0 621 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc22a28B2RT89 552 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Atp6ap1lD3Z5W0 336 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Kcnmb3E9Q7U0 239 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 NnmtO55239 264 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 OsmrO70458 971 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nfatc1O88942 717 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tk1P04184 233 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Kcne1P23299 129 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sult2a1P52843 285 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Lad1P57016 528 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sf3b6P59708 125 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms