RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CRATP43155 626 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 ARF3P61204 181 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-234ENST00000642041 YBX1P67809 324 aaKnown RBP16.16■□□□□ 0.18
PHGDH-234ENST00000642041 TNFRSF17Q02223 184 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 ZFP36L1Q07352 338 aaKnown RBP16.16■□□□□ 0.18
PHGDH-234ENST00000642041 KLRB1Q12918 225 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 SQSTM1Q13501 440 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 SELPLGQ14242 412 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 SAXO2Q658L1 398 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 TMEM214Q6NUQ4 689 aaKnown RBP16.16■□□□□ 0.18
PHGDH-234ENST00000642041 ZCCHC12Q6PEW1 402 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 CBLL1Q75N03 491 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 PLD3Q8IV08 490 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 ZZZ3Q8IYH5 903 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 CSNK1A1LQ8N752 337 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 PMM1Q92871 262 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 SLCO4A1Q96BD0 722 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 SLC47A1Q96FL8 570 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 TRAPPC9Q96Q05 1148 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 ANKHQ9HCJ1 492 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 DAPP1Q9UN19 280 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 ESPL1Q14674 2120 aa16.16■□□□□ 0.18
PHGDH-234ENST00000642041 RNF103-CHMP3A0A140T963 221 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 C5orf58C9J3I9 102 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 RTCAO00442 366 aaKnown RBP16.15■□□□□ 0.18
PHGDH-234ENST00000642041 GNGT2O14610 69 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 PPM1DO15297 605 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 ASNA1O43681 348 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 SERPINB7O75635 380 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 PRSS23O95084 383 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 RPLP0P05388 317 aaKnown RBP16.15■□□□□ 0.18
PHGDH-234ENST00000642041 DCTP40126 519 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 UQCRFS1P47985 274 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 CCT3P49368 545 aaKnown RBP16.15■□□□□ 0.18
PHGDH-234ENST00000642041 RPS6KA3P51812 740 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 MC1RQ01726 317 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 RFX4Q33E94 735 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 ZNF385BQ569K4 471 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 SDK2Q58EX2 2172 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 CRB2Q5IJ48 1285 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 ANGPTL8Q6UXH0 198 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 PIWIL3Q7Z3Z3 882 aaKnown RBP16.15■□□□□ 0.18
PHGDH-234ENST00000642041 HIPK1Q86Z02 1210 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 APLFQ8IW19 511 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-234ENST00000642041 OR4K14Q8NGD5 310 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 OR8K5Q8NH50 307 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 LRTOMTQ8WZ04 291 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 N4BP2L2Q92802 583 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-234ENST00000642041 CCDC74AQ96AQ1 378 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 MVB12AQ96EY5 273 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 ABHD17AQ96GS6 310 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 ZNF347Q96SE7 839 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 ZNF607Q96SK3 696 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 CMKLR1Q99788 373 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 LRRN3Q9H3W5 708 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 A4GALTQ9NPC4 353 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 IFT80Q9P2H3 777 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-234ENST00000642041 LIPT1Q9Y234 373 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 PCDHGB3Q9Y5G1 929 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 F8P00451 2351 aa16.15■□□□□ 0.18
PHGDH-234ENST00000642041 A1L4Q6 167 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 STMND1H3BQB6 276 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 EMC8O43402 210 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 TNFRSF21O75509 655 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 HPRP00739 348 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 FHP07954 510 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 PEX2P28328 305 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 SOAT1P35610 550 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 MLLT10P55197 1068 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 DSTNP60981 165 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 SELENOWP63302 87 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 CDK6Q00534 326 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 GTDC1Q4AE62 458 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 TMEM164Q5U3C3 297 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 REEP3Q6NUK4 255 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF793Q6ZN11 406 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 RNF111Q6ZNA4 994 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 KRT73Q86Y46 540 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 ZDHHC13Q8IUH4 622 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 MCATQ8IVS2 390 aaKnown RBP16.14■□□□□ 0.17
PHGDH-234ENST00000642041 SFTPA2Q8IWL1 248 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 DNAJC22Q8N4W6 341 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 TTC29Q8NA56 475 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-234ENST00000642041 MIPOL1Q8TD10 442 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 JPH3Q8WXH2 748 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-234ENST00000642041 NKD1Q969G9 470 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 EXOSC8Q96B26 276 aaKnown RBP16.14■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF285Q96NJ3 590 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 AMDHD1Q96NU7 426 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 PELOQ9BRX2 385 aaKnown RBP16.14■□□□□ 0.17
PHGDH-234ENST00000642041 CHST8Q9H2A9 424 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 KLHL31Q9H511 634 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 IKZF5Q9H5V7 419 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 EPS8L2Q9H6S3 715 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 EVA1AQ9H8M9 152 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 IL1RAPQ9NPH3 570 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 SEMA5BQ9P283 1151 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 PTGFRNQ9P2B2 879 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 LRIT1Q9P2V4 623 aa16.14■□□□□ 0.17
PHGDH-234ENST00000642041 CDC14AQ9UNH5 594 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms