RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	LTB4R	Q15722	352 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	C3AR1	Q16581	482 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	NTRK2	Q16620	822 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	TRMT12	Q53H54	448 aa	Known RBP	13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	ARL13A	Q5H913	290 aa	Predicted RBP	13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	KANK2	Q63ZY3	851 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	FAM71E1	Q6IPT2	247 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	NOXRED1	Q6NXP6	359 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	MTFR2	Q6P444	385 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZCCHC23	Q6ZST2	131 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	SLC22A16	Q86VW1	577 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	CHERP	Q8IWX8	916 aa	Known RBP	13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	FBXW8	Q8N3Y1	598 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	OR10G3	Q8NGC4	313 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	OR52N2	Q8NGI0	321 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF675	Q8TD23	568 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	IL1RL2	Q9HB29	575 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	LRTM1	Q9HBL6	345 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	MYNN	Q9NPC7	610 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	C1orf109	Q9NX04	203 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	CNIH4	Q9P003	139 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	SUCO	Q9UBS9	1254 aa	Known RBP	13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	DTX4	Q9Y2E6	619 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	NPFFR2	Q9Y5X5	522 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	TP53I11	O14683	189 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNHIT1	O43257	154 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	CTIF	O43310	598 aa	Known RBP	13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	CDC40	O60508	579 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	BCAS2	O75934	225 aa	Predicted RBP	13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	CBX7	O95931	251 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	BPGM	P07738	259 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	NEFH	P12036	1026 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	MPI	P34949	423 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	SERPINB5	P36952	375 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	PIGA	P37287	484 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	ETV4	P43268	484 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	TMED10	P49755	219 aa	Known RBP	13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	MRPS35	P82673	323 aa	Known RBP	13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	FOXO1	Q12778	655 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	KIAA0040	Q15053	153 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	CEBPE	Q15744	281 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF628	Q5EBL2	1059 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	CEP85L	Q5SZL2	805 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	TMEM64	Q6YI46	380 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939		Q6ZSR9	355 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	IKBIP	Q70UQ0	350 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	FGD2	Q7Z6J4	655 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	CLYBL	Q8N0X4	340 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	SIMC1	Q8NDZ2	872 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	OR52R1	Q8NGF1	315 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	OR5M3	Q8NGP4	307 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	OR9A2	Q8NGT5	310 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	ERP27	Q96DN0	273 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZIM3	Q96PE6	472 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	BBS4	Q96RK4	519 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	NXF5	Q9H1B4	397 aa	Known RBP	13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	DEFB127	Q9H1M4	99 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	TUBB1	Q9H4B7	451 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZDHHC11	Q9H8X9	412 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	MIEF1	Q9NQG6	463 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	PLSCR2	Q9NRY7	297 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	TUBA8	Q9NY65	449 aa	Predicted RBP	13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	PRODH2	Q9UF12	536 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	TINAG	Q9UJW2	476 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	TRAF6	Q9Y4K3	522 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939	DNAJC15	Q9Y5T4	150 aa		13.84	□□□□□ -0.19
PHGDH-231	ENST00000641939		A0A1B0GTH9	108 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	TMEM233	B4DJY2	109 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	PRRG2	O14669	202 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	ACOX3	O15254	700 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	CLDN1	O95832	211 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	LINC00032	P0C843	101 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	PTGS2	P35354	604 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	EMD	P50402	254 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	KCNJ2	P63252	427 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	RPS6KA2	Q15349	733 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	HYAL4	Q2M3T9	481 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	SH2D4B	Q5SQS7	431 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	PRAMEF20	Q5VT98	475 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	PAOX	Q6QHF9	649 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	CROCCP2	Q86T23	111 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	EXOC3L1	Q86VI1	746 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	TICAM1	Q8IUC6	712 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	DDIAS	Q8IXT1	998 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	FAM9C	Q8IZT9	166 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	TMEM251	Q8N6I4	163 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	OR2T11	Q8NH01	316 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	TWIST2	Q8WVJ9	160 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	KAT2A	Q92830	837 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	HSPBAP1	Q96EW2	488 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	CCDC120	Q96HB5	630 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	LCOR	Q96JN0	433 aa	Predicted RBP	13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	FCRL1	Q96LA6	429 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	ITPA	Q9BY32	194 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	CENPH	Q9H3R5	247 aa		13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	SSU72	Q9NP77	194 aa	Known RBP	13.83	□□□□□ -0.2
PHGDH-231	ENST00000641939	TAS2R7	Q9NYW3	318 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms