RNA–Protein interactions for RNA: ENST00000641575.1

SCN1A-219, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 BASIC

Gene SCN1A, Length 12,874 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-219ENST00000641575 FBXO36Q8NEA4 188 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 OR2T12Q8NG77 320 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PIGXQ8TBF5 258 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SLC2A14Q8TDB8 520 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ACTRT1Q8TDG2 376 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 DCUN1D4Q92564 292 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 COPS8Q99627 209 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SARGQ9BW04 601 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SORBS1Q9BX66 1292 aaKnown RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 DEFB126Q9BYW3 111 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 RNF32Q9H0A6 362 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ISG20L2Q9H9L3 353 aaKnown RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 MEAF6Q9HAF1 191 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SIAEQ9HAT2 523 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TMEM248Q9NWD8 314 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FBXO4Q9UKT5 387 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PDE10AQ9Y233 779 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TMEM131Q92545 1883 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 A0A096LPI6 279 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 E7EQ34 232 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PSMD9O00233 223 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PAPSS1O43252 624 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 DCNP07585 359 aaKnown RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TYRP14679 529 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GSTM3P21266 225 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FDXRP22570 491 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PPT1P50897 306 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 RFTN1Q14699 578 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 BRAT1Q6PJG6 821 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 NAPRTQ6XQN6 538 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 USP30Q70CQ3 517 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TDHQ8IZJ6 230 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ABRAQ8N0Z2 381 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FBXO39Q8N4B4 442 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SCCPDHQ8NBX0 429 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 OR8K5Q8NH50 307 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 RASGRP4Q8TDF6 673 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SLCO2A1Q92959 643 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TNFRSF25Q93038 417 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ZFP3Q96NJ6 502 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 NODALQ96S42 347 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 IL22Q9GZX6 179 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TCEAL2Q9H3H9 227 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 DUSP22Q9NRW4 184 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FBXL12Q9NXK8 326 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 KLHL42Q9P2K6 505 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 WDR45Q9Y484 360 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FMN2Q9NZ56 1722 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 NKX6-3A6NJ46 265 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 SLC9B1P1A6NJY1 282 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 RNF212BA8MTL3 300 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 IMPA2O14732 288 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 HCRTR2O43614 444 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 LDB2O43679 373 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 UGT2B4P06133 528 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF728P0DKX0 622 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 COX6B1P14854 86 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 CD247P20963 164 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 GBX2P52951 348 aaPredicted RBP2.66□□□□□ -1.98
SCN1A-219ENST00000641575 GDF10P55107 478 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 TPBGQ13641 420 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 PDIA5Q14554 519 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 CNN3Q15417 329 aaKnown RBP2.66□□□□□ -1.98
SCN1A-219ENST00000641575 CDHR3Q6ZTQ4 885 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 VTCN1Q7Z7D3 282 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 FBXL14Q8N1E6 418 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 TMEM185AQ8NFB2 350 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 OR4K1Q8NGD4 311 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 PPTC7Q8NI37 304 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 FCAMRQ8WWV6 532 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF75AQ96N20 296 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 SNTG1Q9NSN8 517 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF358Q9NW07 568 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 LMTK2Q8IWU2 1503 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 IGF2RP11717 2491 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 A0A1W2PPK0 400 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 WDR27A2RRH5 827 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 A8MXE2 369 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 GPR89AB7ZAQ6 455 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 DVL2O14641 736 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 CDC14BO60729 498 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 DNAJB5O75953 348 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 SNAPINO95295 136 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 GPR89BP0CG08 455 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 DCTP40126 519 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 SCGB2B2Q4G0G5 96 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 PIWIL4Q7Z3Z4 852 aaKnown RBP2.66□□□□□ -1.98
SCN1A-219ENST00000641575 DTX2Q86UW9 622 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 UBQLNLQ8IYU4 475 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 SPARTQ8N0X7 666 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 OR5T2Q8NGG2 359 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 ZFAND2BQ8WV99 257 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 ACOT11Q8WXI4 607 aaPredicted RBP2.66□□□□□ -1.98
SCN1A-219ENST00000641575 TSSK2Q96PF2 358 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 GAL3ST4Q96RP7 486 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 AGAP2Q99490 1192 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 APOOQ9BUR5 198 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 POTEKPQ9BYX7 375 aa2.66□□□□□ -1.98
SCN1A-219ENST00000641575 CARS2Q9HA77 564 aaKnown RBP2.66□□□□□ -1.98
SCN1A-219ENST00000641575 ACP6Q9NPH0 428 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms