RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CALML5Q9NZT1 146 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 PDP1Q9P0J1 537 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-216ENST00000641375 MRPS33Q9Y291 106 aaKnown RBP15.42■□□□□ 0.06
PHGDH-216ENST00000641375 MYRFQ9Y2G1 1151 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 GPC6Q9Y625 555 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-216ENST00000641375 A0A0G2JPF8 293 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 PRAMEF27A3QJZ7 478 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 HNRNPCL2B2RXH8 293 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 HNRNPCL3B7ZW38 293 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 CHST10O43529 356 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 DNAJB5O75953 348 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 H6PDO95479 791 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 HNRNPCL4P0DMR1 293 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 RNH1P13489 461 aaKnown RBP15.42■□□□□ 0.06
PHGDH-216ENST00000641375 TNFRSF1BP20333 461 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 CD247P20963 164 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 MAN2A2P49641 1150 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 MAPK10P53779 464 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 EMP3P54852 163 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 SRSF5Q13243 272 aaKnown RBP15.42■□□□□ 0.06
PHGDH-216ENST00000641375 PLK5Q496M5 336 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 TSEN54Q7Z6J9 526 aaKnown RBP15.42■□□□□ 0.06
PHGDH-216ENST00000641375 RMND5BQ96G75 393 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-216ENST00000641375 C16orf58Q96GQ5 468 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 ZNF354BQ96LW1 612 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 COL21A1Q96P44 957 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 EQTNQ9NQ60 294 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 KLHL3Q9UH77 587 aa15.42■□□□□ 0.06
PHGDH-216ENST00000641375 A0A087WV62 115 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 A0A0A6YYC8 382 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 I3L1I5 382 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 PFDN1O60925 122 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 RHCEP18577 417 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 IGFBP5P24593 272 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 EPHA8P29322 1005 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 KCNJ5P48544 419 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 HSD11B2P80365 405 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 INAVAQ3KP66 663 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 ZNF628Q5EBL2 1059 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 TMEM52Q8NDY8 209 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 ADAMTS15Q8TE58 950 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 AMBRA1Q9C0C7 1298 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 FAM118AQ9NWS6 357 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 TMEFF2Q9UIK5 374 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 ENPP4Q9Y6X5 453 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 FITM1A5D6W6 292 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 FAM227AF5H4B4 570 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 TNFRSF11BO00300 401 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 FOXS1O43638 330 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 CDH2P19022 906 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 XCR1P46094 333 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 AVPR1BP47901 424 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 ARL4DP49703 201 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 GRM7Q14831 915 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 GPAT3Q53EU6 434 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 KDM4DQ6B0I6 523 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 MFSD12Q6NUT3 480 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 CDC73Q6P1J9 531 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 TTC33Q6PID6 262 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 FAM111BQ6SJ93 734 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 OR6C4Q8NGE1 309 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 ZNF675Q8TD23 568 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 APOBEC4Q8WW27 367 aaKnown RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 TRNT1Q96Q11 434 aaKnown RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 PIP5K1AQ99755 562 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 ANKRA2Q9H9E1 313 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 KIF17Q9P2E2 1029 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 C19orf53Q9UNZ5 99 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-216ENST00000641375 TESMINQ9Y4I5 508 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 LYVE1Q9Y5Y7 322 aa15.41■□□□□ 0.06
PHGDH-216ENST00000641375 NINQ8N4C6 2090 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 ARID1BQ8NFD5 2236 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-216ENST00000641375 A0A1B0GTQ1 180 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 PRAMEF25A6NGN4 478 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 PLOD3O60568 738 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 CLIC3O95833 236 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 SPIBQ01892 262 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 ID2Q02363 134 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 FUT5Q11128 374 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 AMZ1Q400G9 498 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 CYP27C1Q4G0S4 372 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 WDR74Q6RFH5 385 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-216ENST00000641375 MAML2Q8IZL2 1156 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-216ENST00000641375 OTUB1Q96FW1 271 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-216ENST00000641375 SOX17Q9H6I2 414 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-216ENST00000641375 TMEM165Q9HC07 324 aa15.4■□□□□ 0.06
PHGDH-216ENST00000641375 MN1Q10571 1320 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-216ENST00000641375 TMEM221A6NGB7 291 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 H3BNH8 94 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 YKT6O15498 198 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 B4GAT1O43505 415 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 JRKO75564 520 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 CHRM4P08173 479 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 PABPC4LP0CB38 370 aaKnown RBP15.39■□□□□ 0.05
PHGDH-216ENST00000641375 SLC35E2P0CK97 266 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 PNLIPP16233 465 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 NT5EP21589 574 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 DAPP51397 102 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 KCNAB2Q13303 367 aa15.39■□□□□ 0.05
PHGDH-216ENST00000641375 PUM1Q14671 1186 aaKnown RBP eCLIP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms