RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 TGIF2Q9GZN2 237 aa7.9□□□□□ -1.14
NECAP1-227ENST00000640648 RNF39Q9H2S5 420 aa7.9□□□□□ -1.14
NECAP1-227ENST00000640648 ZBTB20Q9HC78 741 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-227ENST00000640648 PURGQ9UJV8 347 aaKnown RBP7.9□□□□□ -1.14
NECAP1-227ENST00000640648 SLC27A6Q9Y2P4 619 aa7.9□□□□□ -1.14
NECAP1-227ENST00000640648 PCDHGA1Q9Y5H4 931 aa7.9□□□□□ -1.14
NECAP1-227ENST00000640648 ATRNL1Q5VV63 1379 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 SMIM35A0A1B0GVV1 85 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 SGK494L7N484 410 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 FAAHO00519 579 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 P2RX6O15547 441 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 CIDEAO60543 219 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 PCDH8O95206 1070 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 ALDOAP04075 364 aaKnown RBP7.9□□□□□ -1.15
NECAP1-227ENST00000640648 FGF4P08620 206 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 PIPP12273 146 aaPredicted RBP7.9□□□□□ -1.15
NECAP1-227ENST00000640648 ITGA3P26006 1051 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 DCTP40126 519 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 CDH12P55289 794 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 WNT7BP56706 349 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 TUSC3Q13454 348 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 ZNF273Q14593 569 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 PCBP1Q15365 356 aaKnown RBP eCLIP7.9□□□□□ -1.15
NECAP1-227ENST00000640648 GUK1Q16774 197 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 FAM174BQ3ZCQ3 159 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 CLEC20AQ6ZU45 233 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 PIM3Q86V86 326 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 MCATQ8IVS2 390 aaKnown RBP7.9□□□□□ -1.15
NECAP1-227ENST00000640648 TRAM1L1Q8N609 369 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 SFXN2Q96NB2 322 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 NAA50Q9GZZ1 169 aaKnown RBP7.9□□□□□ -1.15
NECAP1-227ENST00000640648 C11orf54Q9H0W9 315 aaPredicted RBP7.9□□□□□ -1.15
NECAP1-227ENST00000640648 ATG10Q9H0Y0 220 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 LMAN1LQ9HAT1 526 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 TXNL4BQ9NX01 149 aaKnown RBP7.9□□□□□ -1.15
NECAP1-227ENST00000640648 RAI2Q9Y5P3 530 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 ARL5AQ9Y689 179 aa7.9□□□□□ -1.15
NECAP1-227ENST00000640648 A0A087WZY1 265 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CBY3A6NI87 242 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 MPTX1A8MV57 137 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 TERTO14746 1132 aaKnown RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CPN1P15169 458 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 ATPAF1Q5TC12 328 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CXorf57Q6NSI4 855 aaKnown RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 WDTC1Q8N5D0 677 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 SIDT2Q8NBJ9 832 aaKnown RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 PHYHIPQ92561 330 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 TTPALQ9BTX7 342 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 EIF5A2Q9GZV4 153 aaKnown RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 DUSP21Q9H596 190 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 NMNAT1Q9HAN9 279 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 AIG1Q9NVV5 245 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 LUZP4Q9P127 313 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 GTF2IRD1Q9UHL9 959 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CORINQ9Y5Q5 1042 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 DAPL1A0PJW8 107 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CPED1A4D0V7 1026 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 NME6O75414 186 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 SCG5P05408 212 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 HLA-DQB2P05538 268 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CHRM5P08912 532 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 MGMTP16455 207 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CSKP41240 450 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 ARF5P84085 180 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 FCN2Q15485 313 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 UGT8Q16880 541 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 RIPPLY2Q5TAB7 128 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 UBE2R2Q712K3 238 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CCDC190Q86UF4 302 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 LRRTM3Q86VH5 581 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 FAM217AQ8IXS0 508 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 LILRA2Q8N149 483 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 TMEM130Q8N3G9 435 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 KCNRGQ8N5I3 272 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 ANKLE1Q8NAG6 615 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 FAM83FQ8NEG4 500 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 SNX33Q8WV41 574 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 SLC35F5Q8WV83 523 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 BRI3BPQ8WY22 251 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 HLA-CQ95604 372 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CMBLQ96DG6 245 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 RTP4Q96DX8 246 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 INPP5EQ9NRR6 644 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 ZNF275Q9NSD4 429 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 FKBPLQ9UIM3 349 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 TAAR5O14804 337 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 B4GAT1O43505 415 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 RHOQP17081 205 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 SNCAP37840 140 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 RPS14P62263 151 aaKnown RBP7.89□□□□□ -1.15
NECAP1-227ENST00000640648 PSPHP78330 225 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 RAB11BQ15907 218 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 DNM1P34Q6PK57 102 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 PAQR3Q6TCH7 311 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 VRK3Q8IV63 474 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 AVL9Q8NBF6 648 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 RAB7BQ96AH8 199 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 CMTM3Q96MX0 182 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 TEX101Q9BY14 249 aa7.89□□□□□ -1.15
NECAP1-227ENST00000640648 BCO2Q9BYV7 579 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms