RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 SPHK1Q9NYA1 384 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 BTNL2Q9UIR0 455 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 FPGTO14772 594 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 NFATC1O95644 943 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 IGHV2-70P01814 119 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 OSMP13725 252 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 RHOQP17081 205 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 RAB3BP20337 219 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 PRPS1L1P21108 318 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 MAPK3P27361 379 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 XCR1P46094 333 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SELENOPP49908 381 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 CAV3P56539 151 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 LILRA4P59901 499 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 HMGCS1Q01581 520 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 GK2Q14410 553 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SPDYE7PQ495Y7 208 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 ATAT1Q5SQI0 421 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 ASB18Q6ZVZ8 466 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SIDT2Q8NBJ9 832 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 OR52I1Q8NGK6 324 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 RPLP0P6Q8NHW5 317 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SPPL2AQ8TCT8 520 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 TMEM203Q969S6 136 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 NARS2Q96I59 477 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 RBM14Q96PK6 669 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 FAM126AQ9BYI3 521 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 POLR1EQ9GZS1 481 aaKnown RBP11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SAP130Q9H0E3 1048 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 C11orf16Q9NQ32 467 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 ZSCAN32Q9NX65 697 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 CA5BQ9Y2D0 317 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 OARD1Q9Y530 152 aa11.39□□□□□ -0.59
CAPN3-221ENST00000638141 SMIM28A0A1B0GU29 152 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF593O00488 134 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 FFAR2O15552 330 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 NDUFS6O75380 124 aaKnown RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 RECQL4O94761 1208 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 ARIH2O95376 493 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 SELLP14151 372 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 CPN1P15169 458 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 PITPNBP48739 271 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 SHC2P98077 582 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 MC2RQ01718 297 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 SLC10A7Q0GE19 358 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 LRRC74AQ0VAA2 488 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 DEFB115Q30KQ5 88 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 GGTA1PQ4G0N0 100 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 TEX30Q5JUR7 227 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 CTSL3PQ5NE16 218 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 SLC22A10Q63ZE4 541 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 ALG1LQ6GMV1 187 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 DHRS7BQ6IAN0 325 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 PAQR6Q6TCH4 344 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 UQCC3Q6UW78 93 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 SBSNQ6UWP8 590 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 TMIGD1Q6UXZ0 262 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 IKBIPQ70UQ0 350 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 RNF113BQ8IZP6 322 aaKnown RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 KRT78Q8N1N4 520 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 FAM26EQ8N5C1 309 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 AQP11Q8NBQ7 271 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 DBF4BQ8NFT6 615 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 CSGALNACT1Q8TDX6 532 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 MS4A3Q96HJ5 214 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 CXCL16Q9H2A7 254 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 C8orf33Q9H7E9 229 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 CRTAC1Q9NQ79 661 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 SPATA6Q9NWH7 488 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 DNAJC27Q9NZQ0 273 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 DLGAP4Q9Y2H0 992 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 DHRS7Q9Y394 339 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 CHST2Q9Y4C5 530 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 PCDHB11Q9Y5F2 797 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 HLA-DPB1P04440 258 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 ALDOBP05062 364 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 C1SP09871 688 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 POU3F2P20265 443 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 PTGER3P43115 390 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 PREPP48147 710 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 WDR5P61964 334 aaKnown RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 TAP2Q03519 686 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 BOP1Q14137 746 aaKnown RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 SLC44A3Q8N4M1 653 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 C11orf65Q8NCR3 313 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 PANX1Q96RD7 426 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 IL4I1Q96RQ9 567 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF768Q9H5H4 540 aaKnown RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 HMX1Q9NP08 348 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 TMEM248Q9NWD8 314 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 ASB6Q9NWX5 421 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 PIPOXQ9P0Z9 390 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF624Q9P2J8 865 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 ZMYM5Q9UJ78 669 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 TSR3Q9UJK0 312 aaKnown RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 YARS2Q9Y2Z4 477 aaKnown RBP11.38□□□□□ -0.59
CAPN3-221ENST00000638141 PCDHB1Q9Y5F3 818 aa11.38□□□□□ -0.59
CAPN3-221ENST00000638141 GREB1Q4ZG55 1949 aa11.37□□□□□ -0.59
CAPN3-221ENST00000638141 GCM2O75603 506 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms