RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	ZGLP1	P0C6A0	271 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	HOXB6	P17509	224 aa	Known RBP	11	□□□□□ -0.65
CLN6-223	ENST00000637823	TNNI3	P19429	210 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	S1PR1	P21453	382 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	KDELR2	P33947	212 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	SOX18	P35713	384 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	MAN2A2	P49641	1150 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	RPS26	P62854	115 aa	Known RBP	11	□□□□□ -0.65
CLN6-223	ENST00000637823	CDK6	Q00534	326 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	EIF3I	Q13347	325 aa	Known RBP	11	□□□□□ -0.65
CLN6-223	ENST00000637823	SCARB2	Q14108	478 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	GNA13	Q14344	377 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	MYBPC3	Q14896	1274 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	SNCB	Q16143	134 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	MINDY4	Q4G0A6	757 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	MFSD4B	Q5TF39	518 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	REEP3	Q6NUK4	255 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	MFSD12	Q6NUT3	480 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	DHRS13	Q6UX07	377 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	DGAT2L6	Q6ZPD8	337 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	CCDC80	Q76M96	950 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	SLCO6A1	Q86UG4	719 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	GALNT12	Q8IXK2	581 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	LGI4	Q8N135	537 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	CACTIN-AS1	Q8N1I8	211 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	VWA5B2	Q8N398	1253 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	DEFB124	Q8NES8	71 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	STT3B	Q8TCJ2	826 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	CANT1	Q8WVQ1	401 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	XAGE5	Q8WWM1	108 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	MAL2	Q969L2	176 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	FKBP10	Q96AY3	582 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	GIMAP5	Q96F15	307 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	C16orf58	Q96GQ5	468 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	TAAR9	Q96RI9	348 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	EFHD1	Q9BUP0	239 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	ASPSCR1	Q9BZE9	553 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	SLC26A1	Q9H2B4	701 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	SERHL2	Q9H4I8	314 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	ANKRA2	Q9H9E1	313 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	CCM2L	Q9NUG4	571 aa	Predicted RBP	11	□□□□□ -0.65
CLN6-223	ENST00000637823	C14orf105	Q9NVL8	296 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	NKX1-2	Q9UD57	310 aa	Predicted RBP	11	□□□□□ -0.65
CLN6-223	ENST00000637823	ANGPTL2	Q9UKU9	493 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	MKL2	Q9ULH7	1088 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	AP4S1	Q9Y587	144 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	ZNF292	O60281	2723 aa		11	□□□□□ -0.65
CLN6-223	ENST00000637823	TCRBV16S1A1N1	A0A5B0	115 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	DHRS12	A0PJE2	317 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	VSTM2B	A6NLU5	285 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	C5orf58	C9J3I9	102 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823		H3BNX3	289 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	COQ9	O75208	318 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	BAG2	O95816	211 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	RECK	O95980	971 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	CYC1	P08574	325 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	CT62	P0C5K7	136 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	OR12D1	P0DN82	309 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	ANPEP	P15144	967 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	CSRP1	P21291	193 aa	Known RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	PSMA4	P25789	261 aa	Known RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	SLC34A1	Q06495	639 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	ELOA	Q14241	798 aa	Known RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	LASP1	Q14847	261 aa	Known RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	CDC73	Q6P1J9	531 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	PATL1	Q86TB9	770 aa	Known RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	LAPTM4B	Q86VI4	370 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	TMEM151B	Q8IW70	566 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	ADGRG5	Q8IZF4	528 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	PAPD5	Q8NDF8	572 aa	Known RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	NFKBID	Q8NI38	313 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	ADAMTS15	Q8TE58	950 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	SLC38A5	Q8WUX1	472 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	RAB8B	Q92930	207 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	SLCO4A1	Q96BD0	722 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	OR7D2	Q96RA2	312 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	YIPF4	Q9BSR8	244 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	DDA1	Q9BW61	102 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	UGT2B28	Q9BY64	529 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	VN1R1	Q9GZP7	353 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	PNO1	Q9NRX1	252 aa	Known RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	ARMC1	Q9NVT9	282 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	IFT80	Q9P2H3	777 aa	Predicted RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	P2RX2	Q9UBL9	471 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	CTSF	Q9UBX1	484 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	GPN3	Q9UHW5	284 aa	Predicted RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	ANAPC2	Q9UJX6	822 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	RPS6KA6	Q9UK32	745 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	SAMD4A	Q9UPU9	718 aa	Known RBP	10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	LIPT1	Q9Y234	373 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	ANGPT4	Q9Y264	503 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	PCDHGA8	Q9Y5G5	932 aa		10.99	□□□□□ -0.65
CLN6-223	ENST00000637823	PTPRB	P23467	1997 aa		10.98	□□□□□ -0.65
CLN6-223	ENST00000637823	PLD2	O14939	933 aa		10.98	□□□□□ -0.65
CLN6-223	ENST00000637823	HNRNPR	O43390	633 aa	Known RBP	10.98	□□□□□ -0.65
CLN6-223	ENST00000637823	DYRK3	O43781	588 aa		10.98	□□□□□ -0.65
CLN6-223	ENST00000637823	SLC28A2	O43868	658 aa		10.98	□□□□□ -0.65
CLN6-223	ENST00000637823	GCM2	O75603	506 aa	Predicted RBP	10.98	□□□□□ -0.65
CLN6-223	ENST00000637823	CBX7	O95931	251 aa		10.98	□□□□□ -0.65
CLN6-223	ENST00000637823	SERPINA1	P01009	418 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms