RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 FARSBQ9NSD9 589 aaKnown RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 ZNF629Q9UEG4 869 aaPredicted RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 MTRF1LQ9UGC7 380 aaKnown RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 DTX4Q9Y2E6 619 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 NF1P21359 2839 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 MAP1AP78559 2803 aaPredicted RBP16.89■□□□□ 0.29
CLN6-220ENST00000637450 ITPR3Q14573 2671 aa16.89■□□□□ 0.29
CLN6-220ENST00000637450 C1orf226A1L170 272 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 FAM221AA4D161 298 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 PPP6CO00743 305 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 GUCY1B2O75343 617 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 PDYNP01213 254 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 RPS17P08708 135 aaKnown RBP16.88■□□□□ 0.29
CLN6-220ENST00000637450 BMP5P22003 454 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 UQCRC1P31930 480 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 MASP1P48740 699 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 IST1P53990 364 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 WNT3P56703 355 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 GALNT1Q10472 559 aaPredicted RBP16.88■□□□□ 0.29
CLN6-220ENST00000637450 SF3B4Q15427 424 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLN6-220ENST00000637450 PRICKLE4Q2TBC4 344 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 TIGD3Q6B0B8 471 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 FAM111BQ6SJ93 734 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 RPS27LQ71UM5 84 aaKnown RBP16.88■□□□□ 0.29
CLN6-220ENST00000637450 VWA5B2Q8N398 1253 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 TMEM151AQ8N4L1 468 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 ZNF483Q8TF39 744 aaPredicted RBP16.88■□□□□ 0.29
CLN6-220ENST00000637450 TM4SF18Q96CE8 201 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 PAFAH2Q99487 392 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 SH3GL2Q99962 352 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 TSPYL1Q9H0U9 437 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 CRIM1Q9NZV1 1036 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 ZNF639Q9UID6 485 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 SLC12A4Q9UP95 1085 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 CFL2Q9Y281 166 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 SLC6A5Q9Y345 797 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 NCKAP5O14513 1909 aa16.88■□□□□ 0.29
CLN6-220ENST00000637450 GOLGA6L10A6NI86 522 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 CDH16O75309 829 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 PPM1BO75688 479 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 KRT38O76015 456 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 OTCP00480 354 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 IL2RAP01589 272 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 ATP1B1P05026 303 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 SBK3P0C264 359 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 BMP7P18075 431 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 KRT15P19012 456 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 CSNK2A2P19784 350 aaPredicted RBP16.87■□□□□ 0.29
CLN6-220ENST00000637450 PTPN6P29350 595 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 DEKP35659 375 aaKnown RBP16.87■□□□□ 0.29
CLN6-220ENST00000637450 SOX18P35713 384 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 FEN1P39748 380 aaKnown RBP16.87■□□□□ 0.29
CLN6-220ENST00000637450 ASCL1P50553 236 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 FBXL19-AS1Q494R0 122 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 EIPR1Q53HC9 387 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 NSUN5P2Q63ZY6 315 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 LETMD1Q6P1Q0 360 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 TMEM81Q6P7N7 255 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 MMP21Q8N119 569 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 SELENOMQ8WWX9 145 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 NINJ1Q92982 152 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 RNASE6Q93091 150 aaKnown RBP16.87■□□□□ 0.29
CLN6-220ENST00000637450 HGDQ93099 445 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 WDYHV1Q96HA8 205 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 C1QTNF3Q9BXJ4 246 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 UGT2B28Q9BY64 529 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 POLDIP3Q9BY77 421 aaKnown RBP16.87■□□□□ 0.29
CLN6-220ENST00000637450 MRPL46Q9H2W6 279 aaKnown RBP16.87■□□□□ 0.29
CLN6-220ENST00000637450 BRF2Q9HAW0 419 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 RASSF1Q9NS23 344 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 MAT2BQ9NZL9 334 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 DMGDHQ9UI17 866 aaKnown RBP16.87■□□□□ 0.29
CLN6-220ENST00000637450 ZNF180Q9UJW8 692 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 PSME2Q9UL46 239 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 SNX6Q9UNH7 406 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 AKAP6Q13023 2319 aa16.87■□□□□ 0.29
CLN6-220ENST00000637450 GNB5O14775 395 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 ERAL1O75616 437 aaKnown RBP16.86■□□□□ 0.29
CLN6-220ENST00000637450 CNTFP26441 200 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 ZNF136P52737 540 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 CDH13P55290 713 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 EXOSC7Q15024 291 aaKnown RBP16.86■□□□□ 0.29
CLN6-220ENST00000637450 WIPI1Q5MNZ9 446 aaPredicted RBP16.86■□□□□ 0.29
CLN6-220ENST00000637450 TAOK1Q7L7X3 1001 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 NUP54Q7Z3B4 507 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 SIMC1Q8NDZ2 872 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 OR1J4Q8NGS1 313 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 DCAKDQ8WVC6 231 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 ABTB1Q969K4 478 aaPredicted RBP16.86■□□□□ 0.29
CLN6-220ENST00000637450 CTHRC1Q96CG8 243 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 HSPBAP1Q96EW2 488 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 LRRC46Q96FV0 321 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 LCORQ96JN0 433 aaPredicted RBP16.86■□□□□ 0.29
CLN6-220ENST00000637450 GPATCH1Q9BRR8 931 aaKnown RBP16.86■□□□□ 0.29
CLN6-220ENST00000637450 ITPAQ9BY32 194 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 BRINP2Q9C0B6 783 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 CXXC4Q9H2H0 198 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 METTL7AQ9H8H3 244 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 NMRK1Q9NWW6 199 aa16.86■□□□□ 0.29
CLN6-220ENST00000637450 FETUBQ9UGM5 382 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms