RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PCDHGA1Q9Y5H4 931 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 ASXL3Q9C0F0 2248 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 IGLV3-12A0A075B6K2 115 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 IGKV3D-11A0A0A0MRZ8 115 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 DUXAA6NLW8 204 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 EFCAB7A8K855 629 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 B4E171 279 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 C5orf58C9J3I9 102 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 CPNE3O75131 537 aaKnown RBP14.36□□□□□ -0.11
CLN6-219ENST00000637329 PDE9AO76083 593 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 SOX30O94993 753 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 CYC1P08574 325 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 NT5EP21589 574 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 MATN1P21941 496 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 RORAP35398 523 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 TSPAN7P41732 249 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 RPS26P62854 115 aaKnown RBP14.36□□□□□ -0.11
CLN6-219ENST00000637329 ID2Q02363 134 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 MAP4K2Q12851 820 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 LASP1Q14847 261 aaKnown RBP14.36□□□□□ -0.11
CLN6-219ENST00000637329 MYBPC3Q14896 1274 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 C16orf72Q14CZ0 275 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 CRB2Q5IJ48 1285 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 CDC73Q6P1J9 531 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 FAM111BQ6SJ93 734 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 RNF111Q6ZNA4 994 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 FKBP9P1Q75LS8 142 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 CBLL1Q75N03 491 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 B3GNT8Q7Z7M8 397 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 ZC3H7AQ8IWR0 971 aaKnown RBP14.36□□□□□ -0.11
CLN6-219ENST00000637329 CATSPER1Q8NEC5 780 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 KAT2AQ92830 837 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 MAL2Q969L2 176 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 SLC47A1Q96FL8 570 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 CXorf21Q9HAI6 301 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 FBXO8Q9NRD0 319 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 AGPAT4Q9NRZ5 378 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 CALML5Q9NZT1 146 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 LIPT1Q9Y234 373 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 CLDN16Q9Y5I7 305 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 MAU2Q9Y6X3 613 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 SCN3AQ9NY46 2000 aa14.36□□□□□ -0.11
CLN6-219ENST00000637329 HYAL3O43820 417 aaPredicted RBP14.35□□□□□ -0.11
CLN6-219ENST00000637329 BCHEP06276 602 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 TFPTP0C1Z6 253 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 CDK4P11802 303 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 TGM1P22735 817 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 FASP25445 335 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 OR1D4P47884 311 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 MAN2A2P49641 1150 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 CLCN2P51788 898 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 CRISP3P54108 245 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 PRKAG1P54619 331 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 MRPS35P82673 323 aaKnown RBP14.35□□□□□ -0.11
CLN6-219ENST00000637329 MC2RQ01718 297 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 MGAT2Q10469 447 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 EXOSC6Q5RKV6 272 aaKnown RBP14.35□□□□□ -0.11
CLN6-219ENST00000637329 ATAD3BQ5T9A4 648 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 PWWP2BQ6NUJ5 590 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 LILRA2Q8N149 483 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 TMEM102Q8N9M5 508 aaPredicted RBP14.35□□□□□ -0.11
CLN6-219ENST00000637329 ADCY4Q8NFM4 1077 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 BBS10Q8TAM1 723 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 FBXO30Q8TB52 745 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 FKBP10Q96AY3 582 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 RBM18Q96H35 190 aaKnown RBP14.35□□□□□ -0.11
CLN6-219ENST00000637329 TMEM19Q96HH6 336 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 PYURFQ96I23 114 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 MAGED4Q96JG8 741 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 BTBD2Q9BX70 525 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 ALOXE3Q9BYJ1 711 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 STRADBQ9C0K7 418 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 RXFP3Q9NSD7 469 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 GIN1Q9NXP7 522 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 ZNF639Q9UID6 485 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 GPR179Q6PRD1 2367 aa14.35□□□□□ -0.11
CLN6-219ENST00000637329 TTC36A6NLP5 189 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 TGFBR3LH3BV60 316 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 POLR1CO15160 346 aaPredicted RBP14.34□□□□□ -0.11
CLN6-219ENST00000637329 PEX1O43933 1283 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 PRKD3O94806 890 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 OR12D1P0DN82 309 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 PTGER1P34995 402 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 SOX18P35713 384 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 MAGEA2P43356 314 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 CASP9P55211 416 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 RAB15P59190 212 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 TRIP10Q15642 601 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 ATP6AP1Q15904 470 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 NKAIN1Q4KMZ8 207 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 OGFRL1Q5TC84 451 aaPredicted RBP14.34□□□□□ -0.11
CLN6-219ENST00000637329 PRAMEF17Q5VTA0 474 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 ZNF385CQ66K41 422 aaPredicted RBP14.34□□□□□ -0.11
CLN6-219ENST00000637329 ENPP6Q6UWR7 440 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 COX15Q7KZN9 410 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 GLRX5Q86SX6 157 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 CDRT4Q8N9R6 151 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 SLC38A5Q8WUX1 472 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 RASSF5Q8WWW0 418 aa14.34□□□□□ -0.11
CLN6-219ENST00000637329 LZICQ8WZA0 190 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms