RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 NME6O75414 186 aaPredicted RBP17.43■□□□□ 0.38
CLN8-211ENST00000636934 TNFP01375 233 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 ALPPP05187 535 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 C8orf89P0DMQ9 161 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 CPN2P22792 545 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 C21orf33P30042 268 aaPredicted RBP17.43■□□□□ 0.38
CLN8-211ENST00000636934 IFNA8P32881 189 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 RABIFP47224 123 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 NUDT6P53370 316 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 IRF3Q14653 427 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 ALG11Q2TAA5 492 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 CD300LDQ6UXZ3 194 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 RBM45Q8IUH3 476 aaKnown RBP17.43■□□□□ 0.38
CLN8-211ENST00000636934 ZNF675Q8TD23 568 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 LGALS12Q96DT0 336 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 MSLNLQ96KJ4 702 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 OR2A14Q96R47 310 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 YIPF4Q9BSR8 244 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 CACYBPQ9HB71 228 aaKnown RBP17.43■□□□□ 0.38
CLN8-211ENST00000636934 AMBNQ9NP70 447 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 MMP17Q9ULZ9 603 aa17.43■□□□□ 0.38
CLN8-211ENST00000636934 EFCAB9A8MZ26 197 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 M0R3H8 397 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 STSP08842 583 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 UGT2B7P16662 529 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 GSTM3P21266 225 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 UGT2B10P36537 528 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 IFNGR2P38484 337 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 MC3RP41968 323 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 CLK1P49759 484 aaKnown RBP17.42■□□□□ 0.38
CLN8-211ENST00000636934 VBP1P61758 197 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 FOXD4Q12950 439 aaPredicted RBP17.42■□□□□ 0.38
CLN8-211ENST00000636934 TMED1Q13445 227 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 TPRG1LQ5T0D9 272 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 MEDAGQ5VYS4 303 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 FBXO42Q6P3S6 717 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 FIGLAQ6QHK4 219 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 ABHD13Q7L211 337 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 C16orf62Q7Z3J2 963 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 LACC1Q8IV20 430 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 LRRC25Q8N386 305 aaPredicted RBP17.42■□□□□ 0.38
CLN8-211ENST00000636934 SLC15A4Q8N697 577 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 KCT2Q8NC54 265 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 B3GNT7Q8NFL0 401 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 OR9A2Q8NGT5 310 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 FLVCR1-AS1Q8TAF5 88 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 DYNC2LI1Q8TCX1 351 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 HSPBAP1Q96EW2 488 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 CDCA4Q9BXL8 241 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 RSPO3Q9BXY4 272 aaPredicted RBP17.42■□□□□ 0.38
CLN8-211ENST00000636934 GIN1Q9NXP7 522 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 ACTR10Q9NZ32 417 aa17.42■□□□□ 0.38
CLN8-211ENST00000636934 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLN8-211ENST00000636934 COL4A2P08572 1712 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 ANKRD33BA6NCL7 494 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 H3BN98 237 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 SEMA7AO75326 666 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 NADKO95544 446 aaPredicted RBP17.41■□□□□ 0.38
CLN8-211ENST00000636934 SEMA4FO95754 770 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 SMIM10L1P0DMW3 83 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 ALPPL2P10696 532 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 GLULP15104 373 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 DUSP2Q05923 314 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 FUT5Q11128 374 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 TARDBPQ13148 414 aaKnown RBP eCLIP17.41■□□□□ 0.383e-13■■■■□ 23.5
CLN8-211ENST00000636934 ZNF750Q32MQ0 723 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 TMEM201Q5SNT2 666 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 TMEM236Q5W0B7 351 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 C12orf73Q69YU5 71 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 TMEM92Q6UXU6 159 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 ZNF655Q8N720 491 aaPredicted RBP17.41■□□□□ 0.38
CLN8-211ENST00000636934 OR4K14Q8NGD5 310 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 CCL4L1Q8NHW4 92 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 NDNFQ8TB73 568 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 SLC7A13Q8TCU3 470 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 RSC1A1Q92681 617 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 ZHX1-C8orf76Q96EF9 292 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 C16orf58Q96GQ5 468 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 MSANTD3Q96H12 275 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 SMIM10Q96HG1 83 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 SH3YL1Q96HL8 342 aaPredicted RBP17.41■□□□□ 0.38
CLN8-211ENST00000636934 MS4A4EQ96PG1 132 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 OR2A5Q96R48 311 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 POT1Q9NUX5 634 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 KLHL28Q9NXS3 571 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 NTMQ9P121 344 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 CD207Q9UJ71 328 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 KLK4Q9Y5K2 254 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 SPACA6W5XKT8 324 aa17.41■□□□□ 0.38
CLN8-211ENST00000636934 TRBV23OR9-2A0A075B6M9 112 aa17.4■□□□□ 0.38
CLN8-211ENST00000636934 OR5K4A6NMS3 321 aa17.4■□□□□ 0.38
CLN8-211ENST00000636934 FAM227AF5H4B4 570 aa17.4■□□□□ 0.38
CLN8-211ENST00000636934 PRAMEF26H0Y7S4 382 aa17.4■□□□□ 0.38
CLN8-211ENST00000636934 AIREO43918 545 aa17.4■□□□□ 0.38
CLN8-211ENST00000636934 PFDN1O60925 122 aa17.4■□□□□ 0.38
CLN8-211ENST00000636934 MAGP20916 626 aa17.4■□□□□ 0.38
CLN8-211ENST00000636934 FUT4P22083 530 aa17.4■□□□□ 0.38
CLN8-211ENST00000636934 LSM3P62310 102 aaKnown RBP17.4■□□□□ 0.38
CLN8-211ENST00000636934 PIN1Q13526 163 aaPredicted RBP17.4■□□□□ 0.38
CLN8-211ENST00000636934 NR1D2Q14995 579 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms