RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SLC19A3Q9BZV2 496 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR51B6Q9H340 312 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 DNAJC27Q9NZQ0 273 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 Q9Y3F1 56 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 HS3ST4Q9Y661 456 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PREX1Q8TCU6 1659 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 I3L521 148 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 FOXE1O00358 373 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 GMDSO60547 372 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 LRCH4O75427 683 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RGS9O75916 674 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PAK4O96013 591 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OPN1SWP03999 348 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM11P17152 192 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PRKAR1BP31321 381 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ALDH3B1P43353 468 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 MPP7Q5T2T1 576 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 LYSMD4Q5XG99 296 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR6Q1Q8NGQ2 317 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR5P2Q8WZ92 322 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SGTBQ96EQ0 304 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CDKN2AIPNLQ96HQ2 116 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CRB3Q9BUF7 120 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 YTHDF1Q9BYJ9 559 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PBX4Q9BYU1 374 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 COQ10BQ9H8M1 238 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF225Q9UK10 706 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ATXN7L1Q9ULK2 861 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PRELID1Q9Y255 219 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 DLGAP4Q9Y2H0 992 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ATRNL1Q5VV63 1379 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ARID1BQ8NFD5 2236 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 KIAA1210Q9ULL0 1709 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 C1orf226A1L170 272 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 H7BY64 318 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SYT7O43581 403 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CST3P01034 146 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 IFNA17P01571 189 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 GBAP04062 536 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SOD2P04179 222 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 LCKP06239 509 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 UBL4AP11441 157 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 AOC1P19801 751 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 DRD1P21728 446 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SLC2A5P22732 501 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ETV5P41161 510 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SLC6A8P48029 635 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 MARCKSL1P49006 195 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 HMGCS1Q01581 520 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 LY6G5CQ5SRR4 150 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 GPRC6AQ5T6X5 926 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 NAPRTQ6XQN6 538 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SGPP2Q8IWX5 399 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR13C4Q8NGS5 318 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR2T27Q8NH04 317 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 TSACCQ96A04 125 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PRAP1Q96NZ9 151 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR52B2Q96RD2 323 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 TTTY10Q9BZA0 68 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF638Q14966 1978 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 A6NIZ1 184 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 M0QX08 132 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 TOR1BO14657 336 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 POLR1CO15160 346 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SOX14O95416 240 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CRYBA1P05813 215 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 NTSR1P30989 418 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CD79BP40259 229 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 GSK3AP49840 483 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ACTBP60709 375 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RAP1BP61224 184 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RAP1AP62834 184 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ACTG1P63261 375 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ACSM3Q53FZ2 586 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CYBRD1Q53TN4 286 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 STEAP4Q687X5 459 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SLC27A4Q6P1M0 643 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 VHLLQ6RSH7 139 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 LBX2Q6XYB7 198 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF662Q6ZS27 426 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 C15orf52Q6ZUT6 534 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RBMXL3Q8N7X1 1067 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ACBD4Q8NC06 268 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 TSEN2Q8NCE0 465 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 BBS1Q8NFJ9 593 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR1J2Q8NGS2 313 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 DNAJA3Q96EY1 480 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 NTPCRQ9BSD7 190 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CENPOQ9BU64 300 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 HERC2P3Q9BVR0 1158 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 TPT1P8Q9HAU6 139 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 COQ3Q9NZJ6 369 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 FAM230AA0A1W2PPH8 454 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 A0A1W2PPV4 95 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 GXYLT2A0PJZ3 443 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF860A6NHJ4 632 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 SLC9A3P48764 834 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 RAB5BP61020 215 aa5.3□□□□□ -1.56
SCN1A-209ENST00000635750 KLF1Q13351 362 aaPredicted RBP5.3□□□□□ -1.56
SCN1A-209ENST00000635750 WDR53Q7Z5U6 358 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms