RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 ZNF729A6NN14 1252 aaPredicted RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 SEC14L5O43304 696 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 VEGFDO43915 354 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 MMP20O60882 483 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 SEMG1P04279 462 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 CKMP06732 381 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 C1SP09871 688 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 LAMP1P11279 417 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 CD22P20273 847 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 HNMTP50135 292 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 SMSP52788 366 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 PFN3P60673 137 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 IRF8Q02556 426 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 RPL6Q02878 288 aaKnown RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 C2orf80Q0P641 193 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 MAD2L1BPQ15013 274 aaPredicted RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 PLET1Q6UQ28 207 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 CCDC71Q8IV32 467 aaPredicted RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 GHDCQ8N2G8 530 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 CSGALNACT1Q8TDX6 532 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 NELL2Q99435 816 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 CPEB1Q9BZB8 566 aaKnown RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 OR51E2Q9H255 320 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 CLEC4MQ9H2X3 399 aaPredicted RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 ZDHHC6Q9H6R6 413 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 PRM3Q9NNZ6 103 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 NDRG4Q9ULP0 352 aaKnown RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 CBY1Q9Y3M2 126 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 IGLV3-16A0A075B6K0 115 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 TRAV19A0A0A6YYK7 116 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 A0A0G2JPF8 293 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 C2orf74A8MZ97 194 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 HNRNPCL3B7ZW38 293 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 GFYI3L273 518 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 GPX5O75715 221 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 RLN2P04090 185 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 FBP1P09467 338 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 HNRNPCL4P0DMR1 293 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 GPX2P18283 190 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 RAB25P57735 213 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 CXCR4P61073 352 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 SNRPD1P62314 119 aaKnown RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 SRSF11Q05519 484 aaKnown RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.81□□□□□ -0.52
LITAF-221ENST00000622633 ZNF648Q5T619 568 aaPredicted RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 USP53Q70EK8 1073 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 EIF3MQ7L2H7 374 aaKnown RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 FAM217AQ8IXS0 508 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 CMTM8Q8IZV2 173 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 OR1M1Q8NGA1 313 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 OR6C4Q8NGE1 309 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 WDR36Q8NI36 951 aaKnown RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 GPR151Q8TDV0 419 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 HS6ST2Q96MM7 605 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 KRT84Q9NSB2 600 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 LSM7Q9UK45 103 aaKnown RBP11.81□□□□□ -0.52
LITAF-221ENST00000622633 INSL5Q9Y5Q6 135 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 ANAPC1Q9H1A4 1944 aa11.81□□□□□ -0.52
LITAF-221ENST00000622633 A0A075B6Q4 140 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 TUBAL3A6NHL2 446 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ATG12O94817 140 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 SOD2P04179 222 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 RPLP0P05388 317 aaKnown RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 FHP07954 510 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 CSF3P09919 207 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ATP1B2P14415 290 aaPredicted RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 GJA1P17302 382 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 AQP1P29972 269 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 EIF2S3P41091 472 aaKnown RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 SPINT3P49223 89 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 LGALSLQ3ZCW2 172 aaPredicted RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 XKR6Q5GH73 641 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 KLHL17Q6TDP4 642 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 RBMS3Q6XE24 437 aaKnown RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 MSANTD1Q6ZTZ1 278 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 CBLL1Q75N03 491 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 SLC46A3Q7Z3Q1 461 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 FIBINQ8TAL6 211 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ADAMTS14Q8WXS8 1223 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 SCAMP4Q969E2 229 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 SIGLEC11Q96RL6 698 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 WDR77Q9BQA1 342 aaPredicted RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 REEP1Q9H902 201 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 VPS29Q9UBQ0 182 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 B4GALT6Q9UBX8 382 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 EPHA6Q9UF33 1036 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ING4Q9UNL4 249 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ERVW-1Q9UQF0 538 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 MAB21L2Q9Y586 359 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 TCRBV16S1A1N1A0A5B0 115 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 NRG2O14511 850 aaPredicted RBP11.8□□□□□ -0.52
LITAF-221ENST00000622633 SCAMP1O15126 338 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 TO15178 435 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 MPC1LP0DKB6 136 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ARSBP15848 533 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 ACADLP28330 430 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 GABRR2P28476 465 aa11.8□□□□□ -0.52
LITAF-221ENST00000622633 SSTR2P30874 369 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms