RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 PINX1Q96BK5 328 aaKnown RBP4.03□□□□□ -1.76
CPNE3-213ENST00000622183 TSPAN18Q96SJ8 248 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 GPA33Q99795 319 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 THUMPD2Q9BTF0 503 aaKnown RBP4.03□□□□□ -1.76
CPNE3-213ENST00000622183 ERVK-6Q9BXR3 956 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 SP140LQ9H930 580 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 CIDEBQ9UHD4 219 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 PURGQ9UJV8 347 aaKnown RBP4.03□□□□□ -1.76
CPNE3-213ENST00000622183 IKZF3Q9UKT9 509 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 EMCNQ9ULC0 261 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.03□□□□□ -1.76
CPNE3-213ENST00000622183 SPATA2Q9UM82 520 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 FOXJ3Q9UPW0 622 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 KIF3AQ9Y496 699 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 SYNJ2O15056 1496 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 CNTNAP2Q9UHC6 1331 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 NPIPA5A0A0B4J1W7 369 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 A0A1B0GWJ7 208 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 NPIPA5E9PKD4 350 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 H3BTX0 84 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 DCXO43602 365 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 OAS1P00973 400 aaKnown RBP4.02□□□□□ -1.77
CPNE3-213ENST00000622183 SLC35G4P0C7Q5 338 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 DPEP1P16444 411 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 CYP2F1P24903 491 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 CALML3P27482 149 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 ADRA1AP35348 466 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 CAPGP40121 348 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 PGFP49763 221 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 SIX1Q15475 284 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-213ENST00000622183 GFI1BQ5VTD9 330 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 GALNT17Q6IS24 598 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 ATRAIDQ6UW56 229 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 FAM43BQ6ZT52 329 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-213ENST00000622183 MOB2Q70IA6 237 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 LUZP1Q86V48 1076 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 ZNF573Q86YE8 665 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 PHC2Q8IXK0 858 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 ARL6IP6Q8N6S5 226 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 SAMD12Q8N8I0 201 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 MIPOL1Q8TD10 442 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 AGAP3Q96P47 875 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 ATF6BQ99941 703 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 HSD17B14Q9BPX1 270 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 TRIM51Q9BSJ1 452 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 ST6GALNAC5Q9BVH7 336 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 RBM24Q9BX46 236 aaKnown RBP4.02□□□□□ -1.77
CPNE3-213ENST00000622183 LRRCC1Q9C099 1032 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 ALG9Q9H6U8 611 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 FZR1Q9UM11 496 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 MGAT4AQ9UM21 535 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 SLC9A8Q9Y2E8 581 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 FBXO7Q9Y3I1 522 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 KLF2Q9Y5W3 355 aaPredicted RBP4.02□□□□□ -1.77
CPNE3-213ENST00000622183 AUP1Q9Y679 476 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 NOTCH4Q99466 2003 aa4.02□□□□□ -1.77
CPNE3-213ENST00000622183 SALL1Q9NSC2 1324 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 A0A1B0GUL7 405 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 CPLX1O14810 134 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 SORBS2O94875 1100 aaKnown RBP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 TOXO94900 526 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 ECDO95905 644 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 CA3P07451 260 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 CALCBP10092 127 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 DPP4P27487 766 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 KIF5BP33176 963 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 SLC1A4P43007 532 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 RIDAP52758 137 aaKnown RBP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 PPIAP62937 165 aaKnown RBP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 TRA2BP62995 288 aaKnown RBP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 SRYQ05066 204 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 ELAVL2Q12926 359 aaKnown RBP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 RFTN1Q14699 578 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 TMEM41BQ5BJD5 291 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 FAM182AQ5T1J6 154 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 OTUD3Q5T2D3 398 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 LEG1Q6P5S2 330 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 P4HA3Q7Z4N8 544 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 RPAINQ86UA6 219 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 GIPC3Q8TF64 312 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 TAF15Q92804 592 aaKnown RBP eCLIP4.01□□□□□ -1.77
CPNE3-213ENST00000622183 GPR174Q9BXC1 333 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 GDAP2Q9NXN4 497 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 GPR83Q9NYM4 423 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 MBD2Q9UBB5 411 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 SEC14L4Q9UDX3 406 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 MUTYHQ9UIF7 546 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 FKBP7Q9Y680 259 aa4.01□□□□□ -1.77
CPNE3-213ENST00000622183 CUX2O14529 1486 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 IGHV3OR16-10A0A075B7F0 116 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 LRIT2A6NDA9 550 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 FBLL1A6NHQ2 334 aaKnown RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 A8MXK9 166 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 H7C423 109 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 PDLIM1O00151 329 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 EI24O14681 340 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 ANGPT2O15123 496 aa4□□□□□ -1.77
CPNE3-213ENST00000622183 POP4O95707 220 aaKnown RBP4□□□□□ -1.77
CPNE3-213ENST00000622183 HCKP08631 526 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms