RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 C2orf73Q8N5S3 287 aaPredicted RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 OR5K2Q8NHB8 316 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 TFGQ92734 400 aaPredicted RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 WDR92Q96MX6 357 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 AIF1LQ9BQI0 150 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 MENTQ9BUN1 341 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 ACAT2Q9BWD1 397 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 SIRT3Q9NTG7 399 aaPredicted RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 SCHIP1Q9P0W5 487 aaPredicted RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 RHCGQ9UBD6 479 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 REV1Q9UBZ9 1251 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 TAC3Q9UHF0 121 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 MOSPD1Q9UJG1 213 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 R4GN57 208 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 DMDP11532 3685 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 SNRNP200O75643 2136 aaKnown RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 TRBV4-1A0A0J9YWV2 114 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 SAGE2PA6NJ88 616 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 C5orf58C9J3I9 102 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 B4GALT2O60909 372 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 CNOT3O75175 753 aaKnown RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 PDE9AO76083 593 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 CXCR2P25025 360 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 RPS26P62854 115 aaKnown RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 HEPACAMQ14CZ8 416 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 ZNF181Q2M3W8 571 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 FAM180BQ6P0A1 224 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 TNFAIP8L2Q6P589 184 aaPredicted RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 ENPP7Q6UWV6 458 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 IQCHQ86VS3 1027 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 AMZ2Q86W34 360 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 LYSMD2Q8IV50 215 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 NLGN4XQ8N0W4 816 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 FAM46DQ8NEK8 389 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 F2RL3Q96RI0 385 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 ABCG4Q9H172 646 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 NT5DC2Q9H857 520 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 SP140LQ9H930 580 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 SLC25A19Q9HC21 320 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 LHX9Q9NQ69 397 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 CUEDC1Q9NWM3 386 aaPredicted RBP16.47■□□□□ 0.23
FAM3A-222ENST00000621967 CLN6Q9NWW5 311 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 SLC23A2Q9UGH3 650 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 SUSD2Q9UGT4 822 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 PRKAB1Q9Y478 270 aa16.47■□□□□ 0.23
FAM3A-222ENST00000621967 VPS13AQ96RL7 3174 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 GPR89AB7ZAQ6 455 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 RTCAO00442 366 aaKnown RBP16.46■□□□□ 0.23
FAM3A-222ENST00000621967 SEMA7AO75326 666 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 ATP6V1G1O75348 118 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 OXSR1O95747 527 aaPredicted RBP16.46■□□□□ 0.23
FAM3A-222ENST00000621967 GPR89BP0CG08 455 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 DBTP11182 482 aaKnown RBP16.46■□□□□ 0.23
FAM3A-222ENST00000621967 DDX5P17844 614 aaKnown RBP16.46■□□□□ 0.23
FAM3A-222ENST00000621967 HSD17B2P37059 387 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 GSTM5P46439 218 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 CRISP3P54108 245 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 MANFP55145 182 aaKnown RBP16.46■□□□□ 0.23
FAM3A-222ENST00000621967 PRKCDQ05655 676 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 LPAL2Q16609 132 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 PTCHD4Q6ZW05 846 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 SLC22A16Q86VW1 577 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 SLC22A18ASQ8N1D0 253 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 C1orf216Q8TAB5 229 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 PIGKQ92643 395 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 CENPOQ9BU64 300 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 PITHD1Q9GZP4 211 aaPredicted RBP16.46■□□□□ 0.23
FAM3A-222ENST00000621967 TAS2R16Q9NYV7 291 aa16.46■□□□□ 0.23
FAM3A-222ENST00000621967 MYO15AQ9UKN7 3530 aa16.46■□□□□ 0.22
FAM3A-222ENST00000621967 FAM227AF5H4B4 570 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 ZW10O43264 779 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 OSMP13725 252 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 ELAVL4P26378 380 aaKnown RBP16.45■□□□□ 0.22
FAM3A-222ENST00000621967 ALDH9A1P49189 494 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 UGT2B15P54855 530 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 SNRPGP62308 76 aaKnown RBP16.45■□□□□ 0.22
FAM3A-222ENST00000621967 CYP4F2P78329 520 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 ZNF45Q02386 682 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 ILKQ13418 452 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 TMEM201Q5SNT2 666 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 TPRG1LQ5T0D9 272 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 PLAG1Q6DJT9 500 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 TCTN3Q6NUS6 607 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 ATCAYQ86WG3 371 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 QRFPRQ96P65 431 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 OR5M11Q96RB7 305 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 TAPBPLQ9BX59 468 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 C6orf62Q9GZU0 229 aaPredicted RBP16.45■□□□□ 0.22
FAM3A-222ENST00000621967 PCBD2Q9H0N5 130 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 RNF167Q9H6Y7 350 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 CPNE5Q9HCH3 593 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 FGF22Q9HCT0 170 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 INIPQ9NRY2 104 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 ACAD8Q9UKU7 415 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 MGAT4BQ9UQ53 548 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 SLC17A4Q9Y2C5 497 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 MDC1Q14676 2089 aaKnown RBP16.45■□□□□ 0.22
FAM3A-222ENST00000621967 LOC100506127A0A0U1RQW1 187 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 A0A1W2PPV9 198 aa16.45■□□□□ 0.22
FAM3A-222ENST00000621967 A0A1W2PR77 199 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms