RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 C17orf47Q8NEP4 570 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 CKAP2Q8WWK9 683 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 TP53INP1Q96A56 240 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 TMEM125Q96AQ2 219 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 CIDECQ96AQ7 238 aaPredicted RBP16.91■□□□□ 0.3
LITAF-220ENST00000620789 HES7Q9BYE0 225 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 TRIM4Q9C037 500 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 SLCO1B3Q9NPD5 702 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 KLHL1Q9NR64 748 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 RYDENQ9NUL5 291 aaKnown RBP16.91■□□□□ 0.3
LITAF-220ENST00000620789 HPF1Q9NWY4 346 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 ERVK-11Q9UQG0 969 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 DTX4Q9Y2E6 619 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 NTNG1Q9Y2I2 539 aa16.91■□□□□ 0.3
LITAF-220ENST00000620789 COPG1Q9Y678 874 aaKnown RBP16.91■□□□□ 0.3
LITAF-220ENST00000620789 ATP8B1O43520 1251 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 SP1P08047 785 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 EPHA3P29320 983 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 FRKP42685 505 aaPredicted RBP16.9■□□□□ 0.3
LITAF-220ENST00000620789 EMDP50402 254 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 C21orf58P58505 322 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 HSP90B2PQ58FF3 399 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 FHL5Q5TD97 284 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 IL20RBQ6UXL0 311 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 RIMKLAQ8IXN7 391 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 KRTCAP2Q8N6L1 136 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 OR7G2Q8NG99 324 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 OR7A2PQ8NGA2 310 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 ADIPOR1Q96A54 375 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 MIB2Q96AX9 1013 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 ZBED6CLQ96FA7 236 aaPredicted RBP16.9■□□□□ 0.3
LITAF-220ENST00000620789 MAGEB18Q96M61 343 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 WDR55Q9H6Y2 383 aaPredicted RBP16.9■□□□□ 0.3
LITAF-220ENST00000620789 ANKRA2Q9H9E1 313 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 ASF1BQ9NVP2 202 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 MAP10Q9P2G4 905 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 PRODH2Q9UF12 536 aa16.9■□□□□ 0.3
LITAF-220ENST00000620789 A0A087WV62 115 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 GOLGA8QA0A0J9YX86 632 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 GOLGA8OA6NCC3 632 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 GOLGA8NF8WBI6 632 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 PLOD2O00469 737 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 ZNF195O14628 629 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 NME2P1O60361 137 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 RASAL1O95294 804 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 NME2P22392 152 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 MC3RP41968 323 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 NR0B1P51843 470 aaKnown RBP16.89■□□□□ 0.29
LITAF-220ENST00000620789 CLDN8P56748 225 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 FOXK1P85037 733 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 MAPKAPK3Q16644 382 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 SLC9B1Q4ZJI4 515 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 FAM180AQ6UWF9 173 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 TMEM107Q6UX40 140 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 LYPD8Q6UX82 237 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 ZNF551Q7Z340 670 aaPredicted RBP16.89■□□□□ 0.29
LITAF-220ENST00000620789 MAVSQ7Z434 540 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 GALNTL5Q7Z4T8 443 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 MDGA2Q7Z553 956 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 TAGAPQ8N103 731 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 ZFP28Q8NHY6 868 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 MAELQ96JY0 434 aaKnown RBP16.89■□□□□ 0.29
LITAF-220ENST00000620789 TAAR6Q96RI8 345 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 PRPF18Q99633 342 aaKnown RBP16.89■□□□□ 0.29
LITAF-220ENST00000620789 BARD1Q99728 777 aaKnown RBP16.89■□□□□ 0.29
LITAF-220ENST00000620789 ITPAQ9BY32 194 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 MED4Q9NPJ6 270 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 TIMMDC1Q9NPL8 285 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 ACSS1Q9NUB1 689 aaPredicted RBP16.89■□□□□ 0.29
LITAF-220ENST00000620789 ATAD3AQ9NVI7 634 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 MAPRE3Q9UPY8 281 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 USH1CQ9Y6N9 552 aa16.89■□□□□ 0.29
LITAF-220ENST00000620789 IFI6P09912 130 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 ALDOCP09972 364 aaKnown RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 LAMP1P11279 417 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 MANFP55145 182 aaKnown RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 HSPB3Q12988 150 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 ZNF791Q3KP31 576 aaPredicted RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 CPTPQ5TA50 214 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 RTL4Q6ZR62 310 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 RGS9BPQ6ZS82 235 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 SPATA19Q7Z5L4 167 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 DND1Q8IYX4 353 aaKnown RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 GRHL3Q8TE85 626 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 NUDT8Q8WV74 236 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 COQ8BQ96D53 544 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 SPACA9Q96E40 222 aaPredicted RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 ELP4Q96EB1 424 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 SGCZQ96LD1 299 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 NXF5Q9H1B4 397 aaKnown RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 AGPAT4Q9NRZ5 378 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 DDX18Q9NVP1 670 aaKnown RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 TAS2R9Q9NYW1 312 aa16.88■□□□□ 0.29
LITAF-220ENST00000620789 C19orf53Q9UNZ5 99 aaPredicted RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 KLF13Q9Y2Y9 288 aaPredicted RBP16.88■□□□□ 0.29
LITAF-220ENST00000620789 J3QKU1 62 aa16.87■□□□□ 0.29
LITAF-220ENST00000620789 UPK1AO00322 258 aa16.87■□□□□ 0.29
LITAF-220ENST00000620789 COQ9O75208 318 aa16.87■□□□□ 0.29
LITAF-220ENST00000620789 FBXO45P0C2W1 286 aa16.87■□□□□ 0.29
LITAF-220ENST00000620789 GPC1P35052 558 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms