RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 DUX4L3P0CJ86 424 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 DUX4L4P0CJ87 422 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 DUX4L5P0CJ88 424 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 DUX4L6P0CJ89 424 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 DUX4L7P0CJ90 424 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 CXCL2P19875 107 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 GZMMP51124 257 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 XKP51811 444 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 ITGA1P56199 1179 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 KIAA0040Q15053 153 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 Q6ZSR9 355 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 SERINC5Q86VE9 423 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 OR56A4Q8NGH8 313 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 OR9Q1Q8NGQ5 310 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 OR13C4Q8NGS5 318 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 SCAMP5Q8TAC9 235 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 ASZ1Q8WWH4 475 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 CDK15Q96Q40 435 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 PFDN5Q99471 154 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 RNF208Q9H0X6 261 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 REEP1Q9H902 201 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 POPDC3Q9HBV1 291 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 NUDT15Q9NV35 164 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 C14orf105Q9NVL8 296 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 DUX4Q9UBX2 424 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 EIF2B4Q9UI10 523 aaKnown RBP9.84□□□□□ -0.83
VPS11-207ENST00000620429 PCTPQ9UKL6 214 aa9.84□□□□□ -0.83
VPS11-207ENST00000620429 KIAA0100Q14667 2235 aaKnown RBP9.84□□□□□ -0.83
VPS11-207ENST00000620429 LOC285095A0A1B0GVY8 99 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 PPM1DO15297 605 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 LILRB5O75023 590 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 B3GAT3O94766 335 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 CRYBA1P05813 215 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 ASGR1P07306 291 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 ELNP15502 786 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 MUC1P15941 1255 aaPredicted RBP9.84□□□□□ -0.84
VPS11-207ENST00000620429 LAP3P28838 519 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 STK19P49842 368 aaPredicted RBP9.84□□□□□ -0.84
VPS11-207ENST00000620429 SNRPEP62304 92 aaKnown RBP9.84□□□□□ -0.84
VPS11-207ENST00000620429 PRKCZQ05513 592 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 ZNF155Q12901 538 aaPredicted RBP9.84□□□□□ -0.84
VPS11-207ENST00000620429 MADCAM1Q13477 382 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 SPHARQ15513 63 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 UPP1Q16831 310 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 EXOC3L2Q2M3D2 409 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 PRAMEF13Q5VWM6 474 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 CHRDL2Q6WN34 429 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 IKBIPQ70UQ0 350 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 SKA3Q8IX90 412 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 MSRB3Q8IXL7 192 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 OR5M9Q8NGP3 310 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 DMRTA2Q96SC8 542 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 EPYCQ99645 322 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 WDR77Q9BQA1 342 aaPredicted RBP9.84□□□□□ -0.84
VPS11-207ENST00000620429 KATNB1Q9BVA0 655 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 TMPRSS13Q9BYE2 586 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 ZCCHC2Q9C0B9 1178 aaKnown RBP9.84□□□□□ -0.84
VPS11-207ENST00000620429 DERL2Q9GZP9 239 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 SAP130Q9H0E3 1048 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 DPAGT1Q9H3H5 408 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 OSER1Q9NX31 292 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 TAS2R13Q9NYV9 303 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 CLCA2Q9UQC9 943 aa9.84□□□□□ -0.84
VPS11-207ENST00000620429 POLR3HQ9Y535 204 aaPredicted RBP9.84□□□□□ -0.84
VPS11-207ENST00000620429 FFAR3O14843 346 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 PER2O15055 1255 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 GPR42O15529 346 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 STX11O75558 287 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 PEX11BO96011 259 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 UGT2B7P16662 529 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 BDKRB1P46663 353 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 PCP4P48539 62 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 ZP1P60852 638 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 CACNB2Q08289 660 aaPredicted RBP9.83□□□□□ -0.84
VPS11-207ENST00000620429 MLLT11Q13015 90 aaPredicted RBP9.83□□□□□ -0.84
VPS11-207ENST00000620429 KCNA10Q16322 511 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 SSX2Q16385 188 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 AFMIDQ63HM1 303 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 ALKAL2Q6UX46 152 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 TMEM17Q86X19 198 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 LDLRAD3Q86YD5 345 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 OR4L1Q8NH43 312 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 OR14A16Q8NHC5 309 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 ADAMTS14Q8WXS8 1223 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 NR4A3Q92570 626 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 CNOT9Q92600 299 aaKnown RBP9.83□□□□□ -0.84
VPS11-207ENST00000620429 HMCESQ96FZ2 354 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 NEU1Q99519 415 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 SPATA5L1Q9BVQ7 753 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 ZDHHC4Q9NPG8 344 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 SLC25A37Q9NYZ2 338 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 TRBV5-3A0A0A0MS03 114 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 ARHGEF33A8MVX0 844 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 CSO75390 466 aaKnown RBP9.83□□□□□ -0.84
VPS11-207ENST00000620429 RPP40O75818 363 aaKnown RBP9.83□□□□□ -0.84
VPS11-207ENST00000620429 PAK4O96013 591 aaPredicted RBP9.83□□□□□ -0.84
VPS11-207ENST00000620429 IGLV3-25P01717 112 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 ESR1P03372 595 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 URODP06132 367 aa9.83□□□□□ -0.84
VPS11-207ENST00000620429 ATXN1LP0C7T5 689 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms