RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 KIAA1143Q96AT1 154 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 APIPQ96GX9 242 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 HEBP1Q9NRV9 189 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 DNAJC27Q9NZQ0 273 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 LRRN3E7EW58 273 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 SCDO00767 359 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 HTR1AP08908 422 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 GADD45AP24522 165 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 OR12D2P58182 307 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 RAB5BP61020 215 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 PITX1P78337 314 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 DOC2AQ14183 400 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ATCAYQ86WG3 371 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 NUDT13Q86X67 352 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 CCDC28AQ8IWP9 274 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ELMOD2Q8IZ81 293 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ARL14Q8N4G2 192 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ZNF548Q8NEK5 533 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 CNTNAP3BQ96NU0 1288 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 GON7Q9BXV9 100 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 LRRN3Q9H3W5 708 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 WDR26Q9H7D7 661 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 METTL8Q9H825 291 aaKnown RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 MGAT4CQ9UBM8 478 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ACSL6Q9UKU0 697 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 DNAJC15Q9Y5T4 150 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 TTC3P53804 2025 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 MT-ND2P03891 347 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 CCL5P13501 91 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 TIA1P31483 386 aaKnown RBP eCLIP2.92□□□□□ -1.94
LPP-221ENST00000618621 BTCP35070 178 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ADRA1AP35348 466 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 FNTBP49356 437 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 NTRK2Q16620 822 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 SLC18B1Q6NT16 456 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 VITQ6UXI7 678 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 AUTS2Q8WXX7 1259 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ISL2Q96A47 359 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 SMURF1Q9HCE7 757 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 BABAM2Q9NXR7 383 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 GNG8Q9UK08 70 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 FXYD6-FXYD2A0A087WZ82 144 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 A0A1B0GTW7 788 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 LATO43561 262 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 MITFO75030 526 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 CNMDO75829 334 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 CHRM5P08912 532 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 ERVPABLB-1P60509 514 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 MADCAM1Q13477 382 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 LAPTM4AQ15012 233 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 OR4C11Q6IEV9 310 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 OR8S1Q8NH09 359 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 PTERQ96BW5 349 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 SECISBP2Q96T21 854 aaKnown RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 INPP5KQ9BT40 448 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 PITHD1Q9GZP4 211 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 FXYD6Q9H0Q3 95 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ZCCHC3Q9NUD5 404 aaKnown RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 LYARQ9NX58 379 aaKnown RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 ERVK13-1Q9NX77 482 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 GSKIPQ9P0R6 139 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ZSCAN5BA6NJL1 495 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 GABRR3A8MPY1 467 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 VNN2O95498 520 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ALPPL2P10696 532 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 LAMP1P11279 417 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 CXCR1P25024 350 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 GABRB3P28472 473 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ACTR1BP42025 376 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 EMP3P54852 163 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 SNRPGP62308 76 aaKnown RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 GHRHRQ02643 423 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 RING1Q06587 406 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 ARHGAP19Q14CB8 494 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 GRHL2Q6ISB3 625 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 LINC00299Q6ZSB3 139 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 WDR53Q7Z5U6 358 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 VWA5B2Q8N398 1253 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 NEIL3Q8TAT5 605 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 HAVCR2Q8TDQ0 301 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 TESCQ96BS2 214 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 METTL2AQ96IZ6 378 aaKnown RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 GPR78Q96P69 363 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 F2RL3Q96RI0 385 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 THAP7Q9BT49 309 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 RDH14Q9HBH5 336 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 TBC1D24Q9ULP9 559 aa2.92□□□□□ -1.94
LPP-221ENST00000618621 COL1A1P02452 1464 aaPredicted RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 ARHGEF28Q8N1W1 1705 aaKnown RBP2.92□□□□□ -1.94
LPP-221ENST00000618621 ADAM23O75077 832 aa2.91□□□□□ -1.94
LPP-221ENST00000618621 RPP14O95059 124 aaKnown RBP2.91□□□□□ -1.94
LPP-221ENST00000618621 CSF2P04141 144 aa2.91□□□□□ -1.94
LPP-221ENST00000618621 ERCC1P07992 297 aaPredicted RBP2.91□□□□□ -1.94
LPP-221ENST00000618621 S100A2P29034 98 aa2.91□□□□□ -1.94
LPP-221ENST00000618621 DCTP40126 519 aa2.91□□□□□ -1.94
LPP-221ENST00000618621 WDR5P61964 334 aaKnown RBP2.91□□□□□ -1.94
LPP-221ENST00000618621 ADARB1P78563 741 aaKnown RBP2.91□□□□□ -1.94
LPP-221ENST00000618621 ILF3Q12906 894 aaKnown RBP eCLIP2.91□□□□□ -1.941e-6■■■□□ 15
LPP-221ENST00000618621 TMEM69Q5SWH9 247 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms