RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 GATAD2BQ8WXI9 593 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 TRIM43Q96BQ3 446 aaPredicted RBP11.14□□□□□ -0.63
C11orf54-215ENST00000617482 RSPRY1Q96DX4 576 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 ZNF582Q96NG8 517 aaPredicted RBP11.14□□□□□ -0.63
C11orf54-215ENST00000617482 AMDHD1Q96NU7 426 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 QRFPRQ96P65 431 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 NELL2Q99435 816 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 XKR8Q9H6D3 395 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 EGLN3Q9H6Z9 239 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 PELI2Q9HAT8 420 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 MAN2C1Q9NTJ4 1040 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 CMAHPQ9Y471 501 aa11.14□□□□□ -0.63
C11orf54-215ENST00000617482 A0A1W2PPV9 198 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 A0A1W2PQ09 198 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 LATO43561 262 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 NTN1O95631 604 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 RAB36O95755 333 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 FHP07954 510 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 IL7P13232 177 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 PPP2R1BP30154 601 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SSR2P43308 183 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ELAVL3Q14576 367 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 FAM46CQ5VWP2 391 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 OR4C11Q6IEV9 310 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 FAM131AQ6UXB0 335 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ZNF517Q6ZMY9 492 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SHFQ7M4L6 423 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 LSRQ86X29 649 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 NATD1Q8N6N6 113 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 LINC01555Q8NAE3 123 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 TP53I13Q8NBR0 393 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SLC9A6Q92581 669 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 C1GALT1C1Q96EU7 318 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 MENTQ9BUN1 341 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 POLDIP3Q9BY77 421 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 PLA2G12AQ9BZM1 189 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 KLHL31Q9H511 634 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 WASH6PQ9NQA3 447 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 DDX28Q9NUL7 540 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 FBXW2Q9UKT8 454 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 MRPS23Q9Y3D9 190 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 EDDM13A0A1B0GTR0 161 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 A0A1W2PQL4 384 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 IGLON5A6NGN9 336 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 TBX19O60806 448 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ADH1CP00326 375 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 CHRM4P08173 479 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 TSPAN19P0C672 248 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 MSL3P1P0C860 447 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 C8orf89P0DMQ9 161 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ERGP11308 486 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SDC2P34741 201 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 P2RY2P41231 377 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 PRMT2P55345 433 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 REEP5Q00765 189 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 MLLT1Q03111 559 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 MAP4K2Q12851 820 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 GPR50Q13585 617 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ZNF234Q14588 700 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 LASP1Q14847 261 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ATAD3CQ5T2N8 411 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 METRNLQ641Q3 311 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ZNF544Q6NX49 715 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ZNF793Q6ZN11 406 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ERN2Q76MJ5 926 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SPRED2Q7Z698 418 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 LRRTM4Q86VH4 590 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 UBE2J2Q8N2K1 259 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 WFIKKN2Q8TEU8 576 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 POF1BQ8WVV4 589 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SLC25A46Q96AG3 418 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 BBS4Q96RK4 519 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 TM9SF2Q99805 663 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SRRQ9GZT4 340 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 RACGAP1Q9H0H5 632 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 MMP28Q9H239 520 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ANKRA2Q9H9E1 313 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 MOV10Q9HCE1 1003 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SLC35C2Q9NQQ7 365 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 ACSS1Q9NUB1 689 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 TOR4AQ9NXH8 423 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 TESQ9UGI8 421 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 DIMT1Q9UNQ2 313 aaKnown RBP11.13□□□□□ -0.63
C11orf54-215ENST00000617482 SLC9A8Q9Y2E8 581 aa11.13□□□□□ -0.63
C11orf54-215ENST00000617482 LRRK1Q38SD2 2015 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 TCF20Q9UGU0 1960 aaKnown RBP11.12□□□□□ -0.63
C11orf54-215ENST00000617482 A6NL46 340 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 PGRMC2O15173 223 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 FRS3O43559 492 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 EIF2S1P05198 315 aaKnown RBP11.12□□□□□ -0.63
C11orf54-215ENST00000617482 MYL12AP19105 171 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 SSTR4P31391 388 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 CSNK1G2P78368 415 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 COX10Q12887 443 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 RPA4Q13156 261 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 ARHGAP19Q14CB8 494 aa11.12□□□□□ -0.63
C11orf54-215ENST00000617482 GPAT3Q53EU6 434 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms