RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 HPCAP84074 193 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 ILKQ13418 452 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 DGCR6Q14129 220 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 SEC23BQ15437 767 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 CTF1Q16619 201 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 RNF44Q7L0R7 432 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 ABHD13Q7L211 337 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 LRRC25Q8N386 305 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 BAHD1Q8TBE0 780 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 FAM174AQ8TBP5 190 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 TOE1Q96GM8 510 aaKnown RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 TRNT1Q96Q11 434 aaKnown RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 YIPF4Q9BSR8 244 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 COPS4Q9BT78 406 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 UCK2Q9BZX2 261 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 LYRM4Q9HD34 91 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 SLC2A4RGQ9NR83 387 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 WSB2Q9NYS7 404 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 REV1Q9UBZ9 1251 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 NDOR1Q9UHB4 597 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 SH3PXD2BA1X283 911 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 SH3D21A4FU49 640 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 ZSCAN9O15535 394 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 BCAS1O75363 584 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 FADS2O95864 444 aaKnown RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 EPPINO95925 133 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 CDK1P06493 297 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 ZNF182P17025 639 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 PTGER1P34995 402 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 MAPK10P53779 464 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 RUNX2Q13950 521 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 GPAT3Q53EU6 434 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 SYT13Q7L8C5 426 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 COMTD1Q86VU5 262 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 ZNF655Q8N720 491 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 FLCNQ8NFG4 579 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 OR4K14Q8NGD5 310 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 TBC1D15Q8TC07 691 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 NR4A3Q92570 626 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 GGHQ92820 318 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 TANKQ92844 425 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 WFDC6Q9BQY6 131 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 TCEAL2Q9H3H9 227 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 PLGRKTQ9HBL7 147 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 IMPAD1Q9NX62 359 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 GIN1Q9NXP7 522 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 NDRG2Q9UN36 371 aaKnown RBP14.78□□□□□ -0.04
NR1H3-235ENST00000616973 DUSP12Q9UNI6 340 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 CYP8B1Q9UNU6 501 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 SLC22A7Q9Y694 548 aa14.78□□□□□ -0.04
NR1H3-235ENST00000616973 A0A0J9YY10 115 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 DUXAA6NLW8 204 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 CHURC1-FNTBB4DL54 471 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 MBTPS2O43462 519 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 UGT2B17O75795 530 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 STT3AP46977 705 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 GSSP48637 474 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 UGT2B15P54855 530 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 SNRPNP63162 240 aaKnown RBP14.77□□□□□ -0.04
NR1H3-235ENST00000616973 SMAD4Q13485 552 aaKnown RBP14.77□□□□□ -0.04
NR1H3-235ENST00000616973 AQP6Q13520 282 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 FZD2Q14332 565 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 TBCEQ15813 527 aaPredicted RBP14.77□□□□□ -0.04
NR1H3-235ENST00000616973 ATAD3BQ5T9A4 648 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 USP53Q70EK8 1073 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 DGLUCYQ7Z3D6 616 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 CROCCP3Q8IVE0 287 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 RBM12BQ8IXT5 1001 aaKnown RBP14.77□□□□□ -0.04
NR1H3-235ENST00000616973 ZCCHC10Q8TBK6 192 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 SLC37A2Q8TED4 501 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 PATE1Q8WXA2 126 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 RERGQ96A58 199 aaPredicted RBP14.77□□□□□ -0.04
NR1H3-235ENST00000616973 PRRC1Q96M27 445 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 MS4A4EQ96PG1 132 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 SLC38A1Q9H2H9 487 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 KCNE3Q9Y6H6 103 aa14.77□□□□□ -0.04
NR1H3-235ENST00000616973 LOC105369274A0A096LPK9 316 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 LOC102723532A0A0G2JNH3 316 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 H0YGG7 62 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 M0R3H8 397 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 SLC22A1O15245 554 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 AGR2O95994 175 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 THEGLP0DJG4 465 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 SRFP11831 508 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 ALOX12P18054 663 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 CTSKP43235 329 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 LSSP48449 732 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 XKP51811 444 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 EMP3P54852 163 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 ARF3P61204 181 aaPredicted RBP14.76□□□□□ -0.05
NR1H3-235ENST00000616973 DEFB134Q4QY38 66 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 HEPHL1Q6MZM0 1159 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 PGBD2Q6P3X8 592 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 CD300LDQ6UXZ3 194 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 CCDC81Q6ZN84 652 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 Q6ZS52 159 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 OR4N4Q8N0Y3 316 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 SLC7A13Q8TCU3 470 aa14.76□□□□□ -0.05
NR1H3-235ENST00000616973 OTUB1Q96FW1 271 aaPredicted RBP14.76□□□□□ -0.05
NR1H3-235ENST00000616973 ARHGDIGQ99819 225 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms