RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 IGSF5Q9NSI5 407 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 SLC6A5Q9Y345 797 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 TCRBV21S2A2A0A5A6 115 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 A6NIZ1 184 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 RNASET2O00584 256 aaKnown RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 CASC3O15234 703 aaKnown RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 BEST1O76090 585 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 AK4P27144 223 aaPredicted RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 CD40LGP29965 261 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 SLC6A8P48029 635 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 RAP1BP61224 184 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 RAP1AP62834 184 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 RPP30P78346 268 aaKnown RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 ZNF169Q14929 603 aaPredicted RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 OR4D1Q15615 310 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 LY6G5CQ5SRR4 150 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 TMEM225Q6GV28 225 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 ENPP6Q6UWR7 440 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 ZNF767PQ75MW2 155 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 BEST3Q8N1M1 668 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 GLIS1Q8NBF1 620 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 OR4K1Q8NGD4 311 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 OR13J1Q8NGT2 312 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 ZNF384Q8TF68 577 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 PGAM5Q96HS1 289 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 OR8D2Q9GZM6 311 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 BTNL2Q9UIR0 455 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 SIPA1L3O60292 1781 aaPredicted RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 FBP2O00757 339 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 LILRB3O75022 631 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 KLF8O95600 359 aaPredicted RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 STATHP02808 62 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 GBAP04062 536 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 HTR3AP46098 478 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 CREB5Q02930 508 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 GRB7Q14451 532 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 SPHARQ15513 63 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 CATSPEREQ5SY80 951 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 GARNL3Q5VVW2 1013 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 C22orf42Q6IC83 251 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 RTL6Q6ICC9 239 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 TAS1R3Q7RTX0 852 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 LNX2Q8N448 690 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.36□□□□□ -1.718e-7■■■■■ 29.2
CHD9-221ENST00000615216 OR2T4Q8NH00 348 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 SMARCD2Q92925 531 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 TREX2Q9BQ50 279 aaPredicted RBP4.36□□□□□ -1.71
CHD9-221ENST00000615216 TMEM185BQ9H7F4 350 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 ERVK-18Q9QC07 812 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 ADAMTS6Q9UKP5 1117 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 PRELID1Q9Y255 219 aa4.36□□□□□ -1.71
CHD9-221ENST00000615216 TRAPPC13A5PLN9 417 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 OR6C74A6NCV1 312 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SCAMP1O15126 338 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RNGTTO60942 597 aaKnown RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 SFTPBP07988 381 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CSF1P09603 554 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CAPN3P20807 821 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 MLLT10P55197 1068 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RAB5BP61020 215 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 APOFQ13790 326 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RSU1Q15404 277 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 USF2Q15853 346 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 C15orf39Q6ZRI6 1047 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 TMPRSS12Q86WS5 348 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 KIF18BQ86Y91 864 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ACBD7Q8N6N7 88 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ADAMTS16Q8TE57 1224 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ITFG2Q969R8 447 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ANKRD60Q9BZ19 345 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ZNF701Q9NV72 531 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 PCTPQ9UKL6 214 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 NUBP2Q9Y5Y2 271 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 GLOD5A6NK44 160 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RAC2P15153 192 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 PRKACGP22612 351 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 GNRHRP30968 328 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 DAP3P51398 398 aaKnown RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 PTPRRQ15256 657 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ODF4Q2M2E3 257 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 NCCRP1Q6ZVX7 275 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 WDR53Q7Z5U6 358 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 OR5H2Q8NGV7 314 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 C16orf78Q8WTQ4 265 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RAB8BQ92930 207 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SPTSSAQ969W0 71 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ITPKCQ96DU7 683 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 PGAP3Q96FM1 320 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 NECTIN4Q96NY8 510 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SERINC2Q96SA4 455 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SLC6A7Q99884 636 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CPNE5Q9HCH3 593 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 KLHL42Q9P2K6 505 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CACNG4Q9UBN1 327 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 OR1A2Q9Y585 309 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 BCORQ6W2J9 1755 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 USP54Q70EL1 1684 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 POLR2CP19387 275 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 CELP19835 753 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms