RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PRICKLE3O43900 615 aaPredicted RBP10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C6orf47O95873 294 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SSTR2P30874 369 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 UGT2B10P36537 528 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CLCNKAP51800 687 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TAS2R50P59544 299 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CDK6Q00534 326 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CNTN1Q12860 1018 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MRPL28Q13084 256 aaKnown RBP10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RUNX3Q13761 415 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 COX20Q5RI15 118 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RNLSQ5VYX0 342 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PLET1Q6UQ28 207 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PTCHD4Q6ZW05 846 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TRMT11Q7Z4G4 463 aaKnown RBP10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C17orf64Q86WR6 236 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PIP5K1AQ99755 562 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC6A16Q9GZN6 736 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZC4H2Q9NQZ6 224 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC17A4Q9Y2C5 497 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PRAMEF25A6NGN4 478 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 H3BQ06 376 aaPredicted RBP10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RECKO95980 971 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FCER2P06734 321 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 YES1P07947 543 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ADORA3P0DMS8 318 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HLA-EP13747 358 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SOAT1P35610 550 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RPS19P39019 145 aaKnown RBP10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RGS6P49758 472 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 UGT2B15P54855 530 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HNRNPA0Q13151 305 aaKnown RBP10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HEPACAMQ14CZ8 416 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 POU4F3Q15319 338 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CEBPEQ15744 281 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FAAH2Q6GMR7 532 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF770Q6IQ21 691 aaPredicted RBP10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 VITQ6UXI7 678 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PLA2G15Q8NCC3 412 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LRRC20Q8TCA0 184 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RASSF5Q8WWW0 418 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ELSPBP1Q96BH3 223 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C1GALT1C1Q96EU7 318 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NIPSNAP1Q9BPW8 284 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FUZQ9BT04 418 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C1QTNF2Q9BXJ5 285 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LHX9Q9NQ69 397 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 EVA1BQ9NVM1 165 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ACSL6Q9UKU0 697 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TBC1D24Q9ULP9 559 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PCYT1BQ9Y5K3 369 aaPredicted RBP10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 A3GALT2U3KPV4 340 aa10.27□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 USP34Q70CQ2 3546 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LOC102723532A0A0G2JNH3 316 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SH3D21A4FU49 640 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MPZL2O60487 215 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PEPDP12955 493 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR3A3P47888 321 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MAPK12P53778 367 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 QPRTQ15274 297 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 WSCD2Q2TBF2 565 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C22orf42Q6IC83 251 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MTFR2Q6P444 385 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TMEM64Q6YI46 380 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C16orf62Q7Z3J2 963 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PHC2Q8IXK0 858 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 UBQLNLQ8IYU4 475 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ADGRF3Q8IZF5 1079 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ANKRD53Q8N9V6 530 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR2L8Q8NGY9 312 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CREB3L4Q8TEY5 395 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MYDGFQ969H8 173 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SIPA1Q96FS4 1042 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 WACQ9BTA9 647 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C11orf54Q9H0W9 315 aaPredicted RBP10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TRIM45Q9H8W5 580 aaPredicted RBP10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ACER3Q9NUN7 267 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC23A2Q9UGH3 650 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PSORS1C1Q9UIG5 152 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FBXO9Q9UK97 447 aaPredicted RBP10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ENPP4Q9Y6X5 453 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 A0A0A6YYD5 115 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FAM240BA0A1B0GVZ2 78 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR2B3O76000 313 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLITRK5O94991 958 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TGFB1P01137 390 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KLK1P06870 262 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IL7P13232 177 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 GJA4P35212 333 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ABATP80404 500 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 GPM6BQ13491 265 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TBCEQ15813 527 aaPredicted RBP10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC5A12Q1EHB4 618 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 REEP3Q6NUK4 255 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ADGRD2Q7Z7M1 963 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RAB42Q8N4Z0 105 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SYT14Q8NB59 555 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 B3GNT7Q8NFL0 401 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR5AR1Q8NGP9 310 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms