RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 POLE4Q9NR33 117 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 ZNF229Q9UJW7 825 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 LSM2Q9Y333 95 aaKnown RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 A0A1W2PPV9 198 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 ARHGAP33O14559 1287 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 NDUFS4O43181 175 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 TBX1O43435 398 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 KIAA0513O60268 411 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 MED26O95402 600 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 SEMA4FO95754 770 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 SCG5P05408 212 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 CHRNB1P11230 501 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 SOX6P35712 828 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 EIF2B2P49770 351 aaKnown RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 DGKEP52429 567 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 HSPB3Q12988 150 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 SSX1Q16384 188 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 TSTQ16762 297 aaKnown RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 RNLSQ5VYX0 342 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 ENPP7Q6UWV6 458 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 TRIM69Q86WT6 500 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 CYP4Z2PQ8N1L4 340 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 PARP16Q8N5Y8 322 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 WDR36Q8NI36 951 aaKnown RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 RGMAQ96B86 450 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 FERD3LQ96RJ6 166 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 TIMM29Q9BSF4 260 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 SERHL2Q9H4I8 314 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 DDX31Q9H8H2 851 aaKnown RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 ZSCAN32Q9NX65 697 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 GPC6Q9Y625 555 aaPredicted RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 PNMA8CA0A1B0GUJ8 204 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 H0Y8X5 98 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 TMPRSS11DO60235 418 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 ENTPD6O75354 484 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 HNRNPA2B1P22626 353 aaKnown RBP13.86□□□□□ -0.19
CDH1-213ENST00000612417 POU1F1P28069 291 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 HOXD12P35452 270 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 KRT33BQ14525 404 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 UBXN2BQ14CS0 331 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 PUS10Q3MIT2 529 aaKnown RBP13.86□□□□□ -0.19
CDH1-213ENST00000612417 SPDYE7PQ495Y7 208 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 PGBD2Q6P3X8 592 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 RD3Q7Z3Z2 195 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 RAB8BQ92930 207 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 OPALINQ96PE5 141 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 TREX2Q9BQ50 279 aaPredicted RBP13.86□□□□□ -0.19
CDH1-213ENST00000612417 C11orf16Q9NQ32 467 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 P2RX2Q9UBL9 471 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 CYP8B1Q9UNU6 501 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 A0A075B6Q4 140 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 HAT1O14929 419 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 KDM1AO60341 852 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 CSTF2P33240 577 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDH1-213ENST00000612417 CCT3P49368 545 aaKnown RBP13.86□□□□□ -0.19
CDH1-213ENST00000612417 ALDH6A1Q02252 535 aaKnown RBP13.86□□□□□ -0.19
CDH1-213ENST00000612417 SLC13A2Q13183 592 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 DOC2BQ14184 412 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 NCF4Q15080 339 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 TCEA2Q15560 299 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 THOC7Q6I9Y2 204 aaKnown RBP13.86□□□□□ -0.19
CDH1-213ENST00000612417 CD300LDQ6UXZ3 194 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 GDPGP1Q6ZNW5 385 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 UBE3DQ7Z6J8 389 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 CCDC190Q86UF4 302 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 OR4D11Q8NGI4 311 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 OR8J1Q8NGP2 316 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 KLHL6Q8WZ60 621 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 C12orf66Q96MD2 445 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 FGF22Q9HCT0 170 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 SEMA3GQ9NS98 782 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 TEX10Q9NXF1 929 aaPredicted RBP13.86□□□□□ -0.19
CDH1-213ENST00000612417 QPCTLQ9NXS2 382 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 EHD3Q9NZN3 535 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 SEC14L3Q9UDX4 400 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 FBXL21Q9UKT6 434 aa13.86□□□□□ -0.19
CDH1-213ENST00000612417 GON4LQ3T8J9 2241 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 A0A0A6YYD5 115 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 A0A1W2PRQ8 180 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 FEZF1A0PJY2 475 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 PRSS38A1L453 326 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 PDZK1P1A8MUH7 402 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 H7BY64 318 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 OR10H3O60404 316 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 PSMB5P28074 263 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 AKT2P31751 481 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 XKP51811 444 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 DMPKQ09013 629 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 KRR1Q13601 381 aaKnown RBP13.85□□□□□ -0.19
CDH1-213ENST00000612417 LRRC32Q14392 662 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 OCLNQ16625 522 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 EXOSC8Q96B26 276 aaKnown RBP13.85□□□□□ -0.19
CDH1-213ENST00000612417 TXNDC15Q96J42 360 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 PRAP1Q96NZ9 151 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 IL4I1Q96RQ9 567 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 INSM2Q96T92 566 aaPredicted RBP13.85□□□□□ -0.19
CDH1-213ENST00000612417 NRTNQ99748 197 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 ROGDIQ9GZN7 287 aa13.85□□□□□ -0.19
CDH1-213ENST00000612417 POLR2J3Q9H1A7 115 aaKnown RBP13.85□□□□□ -0.19
CDH1-213ENST00000612417 HHATLQ9HCP6 504 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms