RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 LRRC46Q96FV0 321 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 TMEM41AQ96HV5 264 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 GNRHR2Q96P88 292 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 SH3GL2Q99962 352 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 POLDIP3Q9BY77 421 aaKnown RBP16.26■□□□□ 0.19
SSBP1-215ENST00000612337 ELOVL6Q9H5J4 265 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 CRIM1Q9NZV1 1036 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 ZNF629Q9UEG4 869 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-215ENST00000612337 CFL2Q9Y281 166 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 PCDHA9Q9Y5H5 950 aa16.26■□□□□ 0.19
SSBP1-215ENST00000612337 ABCA4P78363 2273 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 NIPBLQ6KC79 2804 aaeCLIP16.25■□□□□ 0.19
SSBP1-215ENST00000612337 C1orf226A1L170 272 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 FAM221AA4D161 298 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 GUCY1B2O75343 617 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 IL2RAP01589 272 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 ABCB1P08183 1280 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-215ENST00000612337 RPS17P08708 135 aaKnown RBP16.25■□□□□ 0.19
SSBP1-215ENST00000612337 COL6A2P12110 1019 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 NAGAP17050 411 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 KRT15P19012 456 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 SERPINB9P50453 376 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 MAPK12P53778 367 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 MGAT2Q10469 447 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 PRICKLE4Q2TBC4 344 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 SLC48A1Q6P1K1 146 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 POMZP3Q6PJE2 187 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 TAOK1Q7L7X3 1001 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 COMMD6Q7Z4G1 85 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 MILR1Q7Z6M3 343 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 VWA5B2Q8N398 1253 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 OR4F6Q8NGB9 312 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 RNASE6Q93091 150 aaKnown RBP16.25■□□□□ 0.19
SSBP1-215ENST00000612337 NXF5Q9H1B4 397 aaKnown RBP16.25■□□□□ 0.19
SSBP1-215ENST00000612337 MTRF1LQ9UGC7 380 aaKnown RBP16.25■□□□□ 0.19
SSBP1-215ENST00000612337 SLC12A4Q9UP95 1085 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 CAMK2AQ9UQM7 478 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 DTX4Q9Y2E6 619 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 SLC6A5Q9Y345 797 aa16.25■□□□□ 0.19
SSBP1-215ENST00000612337 PRRC2AP48634 2157 aaKnown RBP16.25■□□□□ 0.19
SSBP1-215ENST00000612337 GOLGA6L10A6NI86 522 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 PPM1BO75688 479 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 ATP1B1P05026 303 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 WNT3P56703 355 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 GALNT1Q10472 559 aaPredicted RBP16.24■□□□□ 0.19
SSBP1-215ENST00000612337 MAP4K2Q12851 820 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 FLYWCH1Q4VC44 716 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 SGO1Q5FBB7 561 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 NSUN5P2Q63ZY6 315 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 TIGD3Q6B0B8 471 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 TMEM81Q6P7N7 255 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 HSPBAP1Q96EW2 488 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 PAFAH2Q99487 392 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 FOXC2Q99958 501 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 MRPL57Q9BQC6 102 aaKnown RBP16.24■□□□□ 0.19
SSBP1-215ENST00000612337 GPATCH1Q9BRR8 931 aaKnown RBP16.24■□□□□ 0.19
SSBP1-215ENST00000612337 UGT2B28Q9BY64 529 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 BRINP2Q9C0B6 783 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 CXXC4Q9H2H0 198 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 CLEC4MQ9H2X3 399 aaPredicted RBP16.24■□□□□ 0.19
SSBP1-215ENST00000612337 CDC42EP4Q9H3Q1 356 aaKnown RBP16.24■□□□□ 0.19
SSBP1-215ENST00000612337 BRF2Q9HAW0 419 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 RASSF1Q9NS23 344 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 MAT2BQ9NZL9 334 aa16.24■□□□□ 0.19
SSBP1-215ENST00000612337 FOXD3Q9UJU5 478 aaPredicted RBP16.24■□□□□ 0.19
SSBP1-215ENST00000612337 A0A1B0GTL3 188 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 CD8B2A6NJW9 211 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 GNB5O14775 395 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 KRT38O76015 456 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 OTCP00480 354 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 BMP7P18075 431 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 CNTFP26441 200 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 PTPN6P29350 595 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 DEKP35659 375 aaKnown RBP16.23■□□□□ 0.19
SSBP1-215ENST00000612337 FEN1P39748 380 aaKnown RBP16.23■□□□□ 0.19
SSBP1-215ENST00000612337 ZNF136P52737 540 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 TOMM20Q15388 145 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 EIPR1Q53HC9 387 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 LETMD1Q6P1Q0 360 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 FAM111BQ6SJ93 734 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 NUP54Q7Z3B4 507 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 MMP21Q8N119 569 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 ZNF483Q8TF39 744 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-215ENST00000612337 FAM222BQ8WU58 562 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 SELENOMQ8WWX9 145 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 HGDQ93099 445 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 ABTB1Q969K4 478 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-215ENST00000612337 TM4SF18Q96CE8 201 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 WDYHV1Q96HA8 205 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 LCORQ96JN0 433 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-215ENST00000612337 C1QTNF3Q9BXJ4 246 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 TSPYL1Q9H0U9 437 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 MRPL46Q9H2W6 279 aaKnown RBP16.23■□□□□ 0.19
SSBP1-215ENST00000612337 METTL7AQ9H8H3 244 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 FARSBQ9NSD9 589 aaKnown RBP16.23■□□□□ 0.19
SSBP1-215ENST00000612337 FETUBQ9UGM5 382 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 BCAP29Q9UHQ4 241 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 ZNF639Q9UID6 485 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 ST6GALNAC2Q9UJ37 374 aa16.23■□□□□ 0.19
SSBP1-215ENST00000612337 MPDZO75970 2070 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms