RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	RAB23	Q9ULC3	237 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	SNX8	Q9Y5X2	465 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	GON4L	Q3T8J9	2241 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	TRBC2	A0A5B9	178 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	OR5K4	A6NMS3	321 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	LOC110117498-PIK3R3	F6TDL0	507 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	CAPN5	O15484	640 aa	Predicted RBP	13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	APOA1	P02647	267 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	DDX5	P17844	614 aa	Known RBP	13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	MAOB	P27338	520 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	CASP3	P42574	277 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	LIMS1	P48059	325 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	HMGA2	P52926	109 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	SIGLEC14	Q08ET2	396 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	CYP27C1	Q4G0S4	372 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	SAXO2	Q658L1	398 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	REEP3	Q6NUK4	255 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	ADCK2	Q7Z695	626 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	PIK3R3	Q92569	461 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	NEURL3	Q96EH8	262 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	NIPSNAP1	Q9BPW8	284 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	ORAI3	Q9BRQ5	295 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	ACER3	Q9NUN7	267 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	PCDHGA3	Q9Y5H0	932 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614	ENPP4	Q9Y6X5	453 aa		13.11	□□□□□ -0.31
COPS7B-223	ENST00000611614		J3KTA2	159 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614		K7ESF4	209 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	PDPK1	O15530	556 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	KCNK2	O95069	426 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	GADD45A	P24522	165 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	MANF	P55145	182 aa	Known RBP	13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	HEPACAM	Q14CZ8	416 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	PRRT3	Q5FWE3	981 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	WDR45B	Q5MNZ6	344 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	ZNF605	Q86T29	641 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	AMIGO1	Q86WK6	493 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	DEPDC4	Q8N2C3	294 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	DNAJC22	Q8N4W6	341 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	LINC01555	Q8NAE3	123 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	ZNF486	Q96H40	463 aa	Predicted RBP	13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	COL21A1	Q96P44	957 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	SRMS	Q9H3Y6	488 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	ZNF556	Q9HAH1	456 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	SLAMF7	Q9NQ25	335 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	GPR27	Q9NS67	375 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	OR6C2	Q9NZP2	312 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614		A0A1W2PPV9	198 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	FEZF1	A0PJY2	475 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	CLCA1	A8K7I4	914 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614		H7BY64	318 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	TLR4	O00206	839 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	EML2	O95834	649 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	RHCE	P18577	417 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	PSMB5	P28074	263 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	ALDH9A1	P49189	494 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	PRDX1	Q06830	199 aa	Known RBP	13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	SYT16	Q17RD7	645 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	FAM180B	Q6P0A1	224 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	CEACAM20	Q6UY09	585 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	NRROS	Q86YC3	692 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	TMEFF1	Q8IYR6	380 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	OR4E2	Q8NGC2	313 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	PRAP1	Q96NZ9	151 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	ARPC5L	Q9BPX5	153 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	A4GALT	Q9NPC4	353 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	HCN4	Q9Y3Q4	1203 aa		13.1	□□□□□ -0.31
COPS7B-223	ENST00000611614	KIR2DS5	A0A0G2JLQ3	304 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614		A0A0G2JNG1	304 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	ISM1	B1AKI9	464 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	C5orf58	C9J3I9	102 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	KIR2DS3	K7RE56	304 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	PCDH17	O14917	1159 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	CCNB2	O95067	398 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	GADD45G	O95257	159 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	DBT	P11182	482 aa	Known RBP	13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	SLC19A1	P41440	591 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	ABAT	P80404	500 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	KIR2DS5	Q14953	304 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	ELOC	Q15369	112 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	NUDT13	Q86X67	352 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	TBC1D19	Q8N5T2	526 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	PARP16	Q8N5Y8	322 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	HORMAD2	Q8N7B1	307 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	OR9Q2	Q8NGE9	314 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	ZFPM2	Q8WW38	1151 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	RGMA	Q96B86	450 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	SLC22A18	Q96BI1	424 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	CDADC1	Q9BWV3	514 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	MRPS30	Q9NP92	439 aa	Known RBP	13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614	KLK4	Q9Y5K2	254 aa		13.09	□□□□□ -0.31
COPS7B-223	ENST00000611614		A6NCN8	305 aa		13.08	□□□□□ -0.31
COPS7B-223	ENST00000611614	DSCR3	O14972	297 aa		13.08	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms