RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 SOX30O94993 753 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 OPRD1P41143 372 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 MAP2K4P45985 399 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CRISP1P54107 249 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CSTF1Q05048 431 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CRYZQ08257 329 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 HYAL1Q12794 435 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 VEZF1Q14119 521 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 PUM1Q14671 1186 aaKnown RBP eCLIP6.89□□□□□ -1.317e-7■■□□□ 11.5
CSDE1-218ENST00000610726 EXOSC7Q15024 291 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 SYPL1Q16563 259 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 ODF4Q2M2E3 257 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 GGTA1PQ4G0N0 100 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CCNJQ5T5M9 372 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 LCN1P1Q5VSP4 162 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM236Q5W0B7 351 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 METRNLQ641Q3 311 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CPZQ66K79 652 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM215Q68D42 235 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 MEX3DQ86XN8 651 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 VWA5B2Q8N398 1253 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CREB3L4Q8TEY5 395 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 OSTF1Q92882 214 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF707Q96C28 371 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 C12orf43Q96C57 262 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 METTL2AQ96IZ6 378 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 MAGIXQ9H6Y5 334 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 TBC1D29Q9UFV1 150 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 SLC23A2Q9UGH3 650 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 PLCL2Q9UPR0 1127 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF726A6NNF4 738 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CLDN25C9JDP6 229 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 DCNP07585 359 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 MRPL3P09001 348 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 OR1D4P47884 311 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 PPP2CBP62714 309 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 PPP2CAP67775 309 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 RHAGQ02094 409 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 SLC3A1Q07837 685 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 IL18R1Q13478 541 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 UGT8Q16880 541 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 BCL7AQ4VC05 210 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 KIAA1211LQ6NV74 962 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 XKR5Q6UX68 686 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 TECPR1Q7Z6L1 1165 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 SERPINA11Q86U17 422 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM151BQ8IW70 566 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF676Q8N7Q3 588 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CCL4L1Q8NHW4 92 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 UBTD2Q8WUN7 234 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 HDAC2Q92769 488 aaKnown RBP6.89□□□□□ -1.31
CSDE1-218ENST00000610726 COX4I2Q96KJ9 171 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 MRGPRX1Q96LB2 322 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF583Q96ND8 569 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 LPAR4Q99677 370 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 FOXQ1Q9C009 403 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 ZDHHC5Q9C0B5 715 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 KCNN2Q9H2S1 579 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 POT1Q9NUX5 634 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM45AQ9NWC5 275 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 ERVK-18Q9QC07 812 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 CKLFQ9UBR5 152 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 STOML2Q9UJZ1 356 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 TSC22D4Q9Y3Q8 395 aa6.89□□□□□ -1.31
CSDE1-218ENST00000610726 EP300Q09472 2414 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 GFYI3L273 518 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 FOXE1O00358 373 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 AQP9O43315 295 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 CDC40O60508 579 aaKnown RBP eCLIP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 UGT2B7P16662 529 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MNDAP41218 407 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 EIF1AXP47813 144 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 PPP2R2BQ00005 443 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 PTGES3Q15185 160 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 FAM83HQ6ZRV2 1179 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 PRR22Q8IZ63 422 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 RHBDD1Q8TEB9 315 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 EZH1Q92800 747 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ALG14Q96F25 216 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ERMAPQ96PL5 475 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TMED9Q9BVK6 235 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ITPAQ9BY32 194 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MTHFD2LQ9H903 347 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MRPL39Q9NYK5 338 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MMP17Q9ULZ9 603 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 SPATA2Q9UM82 520 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 ERVK-19Q9WJR5 959 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 EP400Q96L91 3159 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 SIPA1L1O43166 1804 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 A0A0G2JPF8 293 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 TCRBV3S1A0A5B6 114 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 GRXCR2A6NFK2 248 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 HNRNPCL3B7ZW38 293 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MAGEB3O15480 346 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
CSDE1-218ENST00000610726 AIFM1O95831 613 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 MT-ND2P03891 347 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 STSP08842 583 aa6.88□□□□□ -1.31
CSDE1-218ENST00000610726 HNRNPCL4P0DMR1 293 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms