RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 DEF8Q6ZN54 512 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 SLC16A12Q6ZSM3 486 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 USP53Q70EK8 1073 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 AHSA2Q719I0 299 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 AVL9Q8NBF6 648 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 FAM46DQ8NEK8 389 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 C9orf43Q8TAL5 461 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-206ENST00000609853 BAHD1Q8TBE0 780 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-206ENST00000609853 UBE2FQ969M7 185 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 GTPBP3Q969Y2 492 aaKnown RBP11.24□□□□□ -0.61
USP6NL-206ENST00000609853 YIPF6Q96EC8 236 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 PRRC1Q96M27 445 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 Q96MT0 163 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 MS4A4EQ96PG1 132 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 OR7D2Q96RA2 312 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 FUZQ9BT04 418 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 FNDC11Q9BVV2 318 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 SYNPO2LQ9H987 977 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 GIN1Q9NXP7 522 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 ZNF226Q9NYT6 803 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 CNOT2Q9NZN8 540 aaKnown RBP11.24□□□□□ -0.61
USP6NL-206ENST00000609853 PTGFRNQ9P2B2 879 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 DAPP1Q9UN19 280 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 DUSP12Q9UNI6 340 aa11.24□□□□□ -0.61
USP6NL-206ENST00000609853 TRBV23OR9-2A0A075B6M9 112 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SH3PXD2BA1X283 911 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SHISA7A6NL88 538 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CLDN24A6NM45 220 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 WASHC1A8K0Z3 465 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 OR10H3O60404 316 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CTSVO60911 334 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 BCAS1O75363 584 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CHRM4P08173 479 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 ALOX12P18054 663 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CHMP24386 653 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 IFNA8P32881 189 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 MC3RP41968 323 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 MASP1P48740 699 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 XKP51811 444 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 MAPK10P53779 464 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SNRPGP62308 76 aaKnown RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SMAD4Q13485 552 aaKnown RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CTF1Q16619 201 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 ZNF829Q3KNS6 432 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 RNF44Q7L0R7 432 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SYT13Q7L8C5 426 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 P2RY8Q86VZ1 359 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SLC22A18ASQ8N1D0 253 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 OR9A2Q8NGT5 310 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 TBC1D15Q8TC07 691 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 TOE1Q96GM8 510 aaKnown RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CRELD1Q96HD1 420 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 ANKRD19PQ9H560 264 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 C6orf106Q9H6K1 298 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CLN6Q9NWW5 311 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 RHCGQ9UBD6 479 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SLC13A4Q9UKG4 626 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 A4GNTQ9UNA3 340 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SLC22A7Q9Y694 548 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 A0A0J9YVX5 310 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SEMA7AO75326 666 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 ZNF217O75362 1048 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CLPXO76031 633 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SOX30O94993 753 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 FADS2O95864 444 aaKnown RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 ALPPP05187 535 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 C8orf89P0DMQ9 161 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SRFP11831 508 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CTSEP14091 401 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 ZNF182P17025 639 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 GSTM3P21266 225 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 PSMB9P28065 219 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 PRKAR1BP31321 381 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 IFNGR2P38484 337 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 MAP2K4P45985 399 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 DUSP2Q05923 314 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 FUT5Q11128 374 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 EIF2B5Q13144 721 aaKnown RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 FAM214AQ32MH5 1076 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 AP1ARQ63HQ0 302 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 HEPHL1Q6MZM0 1159 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CDC73Q6P1J9 531 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 Q6ZPB1 254 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 PTCHD4Q6ZW05 846 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 C16orf62Q7Z3J2 963 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 TRIM73Q86UV7 250 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 OOSP2Q86WS3 158 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CCDC103Q8IW40 242 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 OR10G6Q8NH81 332 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 VANGL1Q8TAA9 524 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 SLC7A13Q8TCU3 470 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 ADAMTS15Q8TE58 950 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 KLHL6Q8WZ60 621 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 GGHQ92820 318 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 GIMAP5Q96F15 307 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CSF3RQ99062 836 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 RSPO3Q9BXY4 272 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-206ENST00000609853 ITPAQ9BY32 194 aa11.23□□□□□ -0.61
USP6NL-206ENST00000609853 CACYBPQ9HB71 228 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms