RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 RTL6Q6ICC9 239 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 OPN5Q6U736 354 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 FAM47EQ6ZV65 393 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 MRGPRGQ86SM5 289 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 CD163Q86VB7 1156 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 VWA5B2Q8N398 1253 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 FBXW8Q8N3Y1 598 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 MREGQ8N565 214 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 OR7G2Q8NG99 324 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 OR52R1Q8NGF1 315 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 FAM57AQ8TBR7 257 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 RDH11Q8TC12 318 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 TCP10LQ8TDR4 215 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 HGDQ93099 445 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 EXOSC8Q96B26 276 aaKnown RBP9.8□□□□□ -0.84
TUBE1-210ENST00000604967 FCRL1Q96LA6 429 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 SGCZQ96LD1 299 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 FAM173AQ9BQD7 235 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 PELOQ9BRX2 385 aaKnown RBP9.8□□□□□ -0.84
TUBE1-210ENST00000604967 TMEM109Q9BVC6 243 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 BRINP2Q9C0B6 783 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 PPCSQ9HAB8 311 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 IL1RL2Q9HB29 575 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 SACM1LQ9NTJ5 587 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 EHD3Q9NZN3 535 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 UTS2RQ9UKP6 389 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 RAB21Q9UL25 225 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 DNAJC15Q9Y5T4 150 aa9.8□□□□□ -0.84
TUBE1-210ENST00000604967 AKAP9Q99996 3911 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 TACC2O95359 2948 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ATP6AP2A0A1C7CYW4 349 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 C2orf72A6NCS6 295 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 OR6C76A6NM76 312 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ESPNB1AK53 854 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ATP6AP2O75787 350 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 JUNP05412 331 aaKnown RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ABCB1P08183 1280 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 CSNK2A2P19784 350 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ABCD3P28288 659 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 PTGS2P35354 604 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 CORO7P57737 925 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ACSM2AQ08AH3 577 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 TNFAIP8L3Q5GJ75 292 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ARL13AQ5H913 290 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 SLC22A10Q63ZE4 541 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 KANK2Q63ZY3 851 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ACSM2BQ68CK6 577 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ANKRD26P1Q6NSI1 321 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 NOXRED1Q6NXP6 359 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 EMBQ6PCB8 327 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 TRILQ7L0X0 811 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 SLC29A4Q7RTT9 530 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 WDR53Q7Z5U6 358 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 TICAM1Q8IUC6 712 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 LRRC25Q8N386 305 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 SLC15A4Q8N697 577 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 FAM98AQ8NCA5 519 aaKnown RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 FAM13CQ8NE31 585 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 OR4N2Q8NGD1 307 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 SPPL2AQ8TCT8 520 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 TP53INP1Q96A56 240 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 MAGED4Q96JG8 741 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 PKNOX2Q96KN3 472 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ART5Q96L15 291 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 C3orf30Q96M34 536 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 NODALQ96S42 347 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 SLC6A15Q9H2J7 730 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ZNF703Q9H7S9 590 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 SLC35C2Q9NQQ7 365 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 PNPLA3Q9NST1 481 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 GPR55Q9Y2T6 319 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 FAM215AQ9Y5M1 114 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 NPFFR2Q9Y5X5 522 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.79□□□□□ -0.84
TUBE1-210ENST00000604967 ABCA12Q86UK0 2595 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 NINQ8N4C6 2090 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 DNAJC13O75165 2243 aa9.79□□□□□ -0.84
TUBE1-210ENST00000604967 A0A1B0GVC2 190 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 GNG14A0A1W2PPG7 69 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 MYO1GB0I1T2 1018 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 NPIPA2E9PIF3 369 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 NPIPA3F8WFD2 350 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 ITM2AO43736 263 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 TRIM13O60858 407 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 UGT2B11O75310 529 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 RSL1D1O76021 490 aaKnown RBP9.78□□□□□ -0.84
TUBE1-210ENST00000604967 LINC00032P0C843 101 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 CT45A8P0DMV1 189 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 CT45A9P0DMV2 189 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 UROSP10746 265 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 ABOP16442 354 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 DDCP20711 480 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 PRPH2P23942 346 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 CASP3P42574 277 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 KIR3DL1P43629 444 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 PLGLB1Q02325 96 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.78□□□□□ -0.84
TUBE1-210ENST00000604967 RFTN2Q52LD8 501 aaPredicted RBP9.78□□□□□ -0.84
TUBE1-210ENST00000604967 SPIN4Q56A73 249 aa9.78□□□□□ -0.84
TUBE1-210ENST00000604967 CT45A2Q5DJT8 189 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms